Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
RPA3P35244 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
RPA3P35244 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPA3P35244 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.77■□□□□ 0.76
RPA3P35244 AC083906.2-201ENST00000511578 360 ntBASIC19.77■□□□□ 0.76
RPA3P35244 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.77■□□□□ 0.76
RPA3P35244 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.77■□□□□ 0.76
RPA3P35244 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.77■□□□□ 0.76
RPA3P35244 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.77■□□□□ 0.76
RPA3P35244 CYP21A1P-202ENST00000354927 1481 ntBASIC19.77■□□□□ 0.76
RPA3P35244 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPA3P35244 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPA3P35244 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPA3P35244 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RPA3P35244 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RPA3P35244 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RPA3P35244 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.77■□□□□ 0.75
RPA3P35244 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPA3P35244 AC087633.2-202ENST00000565166 1439 ntBASIC19.76■□□□□ 0.75
RPA3P35244 AC010980.2-201ENST00000587099 1412 ntBASIC19.76■□□□□ 0.75
RPA3P35244 MKRN4P-201ENST00000444706 1521 ntBASIC19.76■□□□□ 0.75
RPA3P35244 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.76■□□□□ 0.75
RPA3P35244 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPA3P35244 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.76■□□□□ 0.75
RPA3P35244 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.76■□□□□ 0.75
RPA3P35244 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.76■□□□□ 0.75
RPA3P35244 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RPA3P35244 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.76■□□□□ 0.75
RPA3P35244 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPA3P35244 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.76■□□□□ 0.75
RPA3P35244 GPX1P1-201ENST00000388829 606 ntBASIC19.76■□□□□ 0.75
RPA3P35244 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPA3P35244 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.76■□□□□ 0.75
RPA3P35244 NCF1B-203ENST00000435988 1254 ntBASIC19.76■□□□□ 0.75
RPA3P35244 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.76■□□□□ 0.75
RPA3P35244 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPA3P35244 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.76■□□□□ 0.75
RPA3P35244 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPA3P35244 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.76■□□□□ 0.75
RPA3P35244 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.76■□□□□ 0.75
RPA3P35244 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPA3P35244 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPA3P35244 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPA3P35244 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPA3P35244 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPA3P35244 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPA3P35244 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RPA3P35244 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.76■□□□□ 0.75
RPA3P35244 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPA3P35244 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPA3P35244 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPA3P35244 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPA3P35244 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPA3P35244 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPA3P35244 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPA3P35244 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RPA3P35244 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPA3P35244 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.75■□□□□ 0.75
RPA3P35244 AL138781.2-201ENST00000617896 1843 ntBASIC19.75■□□□□ 0.75
RPA3P35244 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPA3P35244 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.75■□□□□ 0.75
RPA3P35244 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.75■□□□□ 0.75
RPA3P35244 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.75■□□□□ 0.75
RPA3P35244 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.75■□□□□ 0.75
RPA3P35244 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.75■□□□□ 0.75
RPA3P35244 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.75■□□□□ 0.75
RPA3P35244 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPA3P35244 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.75■□□□□ 0.75
RPA3P35244 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.75■□□□□ 0.75
RPA3P35244 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPA3P35244 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.75■□□□□ 0.75
RPA3P35244 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPA3P35244 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPA3P35244 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPA3P35244 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
RPA3P35244 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPA3P35244 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPA3P35244 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
RPA3P35244 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RPA3P35244 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
RPA3P35244 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPA3P35244 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPA3P35244 SLC29A4P1-201ENST00000398760 971 ntBASIC19.74■□□□□ 0.75
RPA3P35244 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.74■□□□□ 0.75
RPA3P35244 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.74■□□□□ 0.75
RPA3P35244 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.74■□□□□ 0.75
RPA3P35244 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPA3P35244 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
RPA3P35244 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
RPA3P35244 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPA3P35244 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RPA3P35244 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPA3P35244 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RPA3P35244 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.74■□□□□ 0.75
RPA3P35244 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RPA3P35244 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPA3P35244 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RPA3P35244 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.74■□□□□ 0.75
RPA3P35244 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.74■□□□□ 0.75
RPA3P35244 AC026471.1-201ENST00000564629 3026 ntBASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms