Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
LSP1P33241 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LSP1P33241 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LSP1P33241 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSP1P33241 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSP1P33241 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
LSP1P33241 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSP1P33241 DUX4L19-201ENST00000557448 1267 ntBASIC19.65■□□□□ 0.74
LSP1P33241 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
LSP1P33241 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
LSP1P33241 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSP1P33241 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSP1P33241 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.65■□□□□ 0.74
LSP1P33241 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSP1P33241 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LSP1P33241 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
LSP1P33241 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LSP1P33241 AP001271.2-201ENST00000624018 1556 ntBASIC19.65■□□□□ 0.74
LSP1P33241 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSP1P33241 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSP1P33241 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSP1P33241 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.65■□□□□ 0.74
LSP1P33241 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.65■□□□□ 0.74
LSP1P33241 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSP1P33241 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.74
LSP1P33241 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
LSP1P33241 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.74
LSP1P33241 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.64■□□□□ 0.74
LSP1P33241 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LSP1P33241 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
LSP1P33241 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LSP1P33241 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
LSP1P33241 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.64■□□□□ 0.73
LSP1P33241 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.64■□□□□ 0.73
LSP1P33241 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.64■□□□□ 0.73
LSP1P33241 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.64■□□□□ 0.73
LSP1P33241 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LSP1P33241 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LSP1P33241 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
LSP1P33241 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.64■□□□□ 0.73
LSP1P33241 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.64■□□□□ 0.73
LSP1P33241 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.64■□□□□ 0.73
LSP1P33241 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LSP1P33241 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.73
LSP1P33241 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LSP1P33241 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
LSP1P33241 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LSP1P33241 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
LSP1P33241 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LSP1P33241 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LSP1P33241 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LSP1P33241 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
LSP1P33241 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.63■□□□□ 0.73
LSP1P33241 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.63■□□□□ 0.73
LSP1P33241 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LSP1P33241 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LSP1P33241 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
LSP1P33241 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
LSP1P33241 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.63■□□□□ 0.73
LSP1P33241 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LSP1P33241 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LSP1P33241 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.63■□□□□ 0.73
LSP1P33241 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.63■□□□□ 0.73
LSP1P33241 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LSP1P33241 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.63■□□□□ 0.73
LSP1P33241 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
LSP1P33241 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LSP1P33241 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LSP1P33241 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LSP1P33241 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.63■□□□□ 0.73
LSP1P33241 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
LSP1P33241 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
LSP1P33241 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
LSP1P33241 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LSP1P33241 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LSP1P33241 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LSP1P33241 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LSP1P33241 AC141586.3-201ENST00000562166 1838 ntBASIC19.62■□□□□ 0.73
LSP1P33241 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.62■□□□□ 0.73
LSP1P33241 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LSP1P33241 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LSP1P33241 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.62■□□□□ 0.73
LSP1P33241 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.62■□□□□ 0.73
LSP1P33241 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.62■□□□□ 0.73
LSP1P33241 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.62■□□□□ 0.73
LSP1P33241 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
LSP1P33241 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LSP1P33241 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
LSP1P33241 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LSP1P33241 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.62■□□□□ 0.73
LSP1P33241 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.62■□□□□ 0.73
LSP1P33241 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.62■□□□□ 0.73
LSP1P33241 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LSP1P33241 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.62■□□□□ 0.73
LSP1P33241 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LSP1P33241 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LSP1P33241 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LSP1P33241 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LSP1P33241 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LSP1P33241 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms