Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.15■□□□□ 0.82
SLC6A4P31645 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC6A4P31645 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SLC6A4P31645 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
SLC6A4P31645 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SLC6A4P31645 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC6A4P31645 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC6A4P31645 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SLC6A4P31645 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
SLC6A4P31645 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC6A4P31645 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC6A4P31645 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.14■□□□□ 0.81
SLC6A4P31645 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC6A4P31645 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC6A4P31645 KRT8P8-201ENST00000434750 1448 ntBASIC20.14■□□□□ 0.81
SLC6A4P31645 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC6A4P31645 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC6A4P31645 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC6A4P31645 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
SLC6A4P31645 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC6A4P31645 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.14■□□□□ 0.81
SLC6A4P31645 AL355075.4-201ENST00000554988 638 ntBASIC20.14■□□□□ 0.81
SLC6A4P31645 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC6A4P31645 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC6A4P31645 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.14■□□□□ 0.81
SLC6A4P31645 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC6A4P31645 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC6A4P31645 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
SLC6A4P31645 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC6A4P31645 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.14■□□□□ 0.81
SLC6A4P31645 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC6A4P31645 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC6A4P31645 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC6A4P31645 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SLC6A4P31645 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC6A4P31645 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
SLC6A4P31645 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.13■□□□□ 0.81
SLC6A4P31645 KRT16P1-201ENST00000399124 1418 ntBASIC20.13■□□□□ 0.81
SLC6A4P31645 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC6A4P31645 KRT17P2-201ENST00000300992 1314 ntBASIC20.13■□□□□ 0.81
SLC6A4P31645 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC6A4P31645 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC6A4P31645 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC6A4P31645 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SLC6A4P31645 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.13■□□□□ 0.81
SLC6A4P31645 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.13■□□□□ 0.81
SLC6A4P31645 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC6A4P31645 HLA-A-209ENST00000638375 975 ntBASIC20.13■□□□□ 0.81
SLC6A4P31645 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.13■□□□□ 0.81
SLC6A4P31645 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC6A4P31645 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.13■□□□□ 0.81
SLC6A4P31645 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SLC6A4P31645 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC6A4P31645 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC6A4P31645 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC6A4P31645 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC6A4P31645 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.13■□□□□ 0.81
SLC6A4P31645 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.12■□□□□ 0.81
SLC6A4P31645 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC6A4P31645 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC6A4P31645 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLC6A4P31645 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLC6A4P31645 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC6A4P31645 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.12■□□□□ 0.81
SLC6A4P31645 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
SLC6A4P31645 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC6A4P31645 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLC6A4P31645 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLC6A4P31645 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLC6A4P31645 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC6A4P31645 NUDT16P1-203ENST00000513809 620 ntBASIC20.12■□□□□ 0.81
SLC6A4P31645 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.12■□□□□ 0.81
SLC6A4P31645 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLC6A4P31645 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.12■□□□□ 0.81
SLC6A4P31645 AP003071.4-201ENST00000562276 1284 ntBASIC20.12■□□□□ 0.81
SLC6A4P31645 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.12■□□□□ 0.81
SLC6A4P31645 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.12■□□□□ 0.81
SLC6A4P31645 AL445675.2-201ENST00000620291 557 ntBASIC20.12■□□□□ 0.81
SLC6A4P31645 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.12■□□□□ 0.81
SLC6A4P31645 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC6A4P31645 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC6A4P31645 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLC6A4P31645 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC6A4P31645 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC6A4P31645 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SLC6A4P31645 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC6A4P31645 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SLC6A4P31645 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SLC6A4P31645 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC6A4P31645 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SLC6A4P31645 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC6A4P31645 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SLC6A4P31645 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.11■□□□□ 0.81
SLC6A4P31645 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC6A4P31645 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
SLC6A4P31645 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.11■□□□□ 0.81
SLC6A4P31645 AL355355.2-201ENST00000442321 338 ntBASIC20.11■□□□□ 0.81
SLC6A4P31645 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.11■□□□□ 0.81
SLC6A4P31645 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.11■□□□□ 0.81
SLC6A4P31645 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms