Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
CLIP1P30622 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC31.18■■■□□ 2.58
CLIP1P30622 RCC2P6-201ENST00000526625 1557 ntBASIC31.17■■■□□ 2.58
CLIP1P30622 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC31.17■■■□□ 2.58
CLIP1P30622 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CLIP1P30622 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
CLIP1P30622 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC31.17■■■□□ 2.58
CLIP1P30622 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC31.17■■■□□ 2.58
CLIP1P30622 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
CLIP1P30622 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
CLIP1P30622 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CLIP1P30622 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CLIP1P30622 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
CLIP1P30622 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CLIP1P30622 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CLIP1P30622 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CLIP1P30622 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CLIP1P30622 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC31.17■■■□□ 2.58
CLIP1P30622 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CLIP1P30622 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CLIP1P30622 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CLIP1P30622 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC31.16■■■□□ 2.58
CLIP1P30622 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CLIP1P30622 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC31.16■■■□□ 2.58
CLIP1P30622 PTPA-216ENST00000432651 857 ntTSL 2 BASIC31.16■■■□□ 2.58
CLIP1P30622 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC31.16■■■□□ 2.58
CLIP1P30622 AC145285.6-201ENST00000604632 637 ntBASIC31.16■■■□□ 2.58
CLIP1P30622 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
CLIP1P30622 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC31.16■■■□□ 2.58
CLIP1P30622 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CLIP1P30622 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC31.16■■■□□ 2.58
CLIP1P30622 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CLIP1P30622 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC31.16■■■□□ 2.58
CLIP1P30622 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CLIP1P30622 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CLIP1P30622 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC31.15■■■□□ 2.58
CLIP1P30622 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC31.15■■■□□ 2.58
CLIP1P30622 DGCR10-201ENST00000609839 495 ntBASIC31.15■■■□□ 2.58
CLIP1P30622 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC31.15■■■□□ 2.58
CLIP1P30622 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC31.15■■■□□ 2.58
CLIP1P30622 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC31.15■■■□□ 2.58
CLIP1P30622 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC31.15■■■□□ 2.58
CLIP1P30622 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC31.15■■■□□ 2.58
CLIP1P30622 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC31.15■■■□□ 2.58
CLIP1P30622 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC31.15■■■□□ 2.58
CLIP1P30622 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
CLIP1P30622 AC112907.3-201ENST00000577781 2400 ntBASIC31.15■■■□□ 2.58
CLIP1P30622 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CLIP1P30622 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC31.15■■■□□ 2.58
CLIP1P30622 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC31.15■■■□□ 2.58
CLIP1P30622 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC31.15■■■□□ 2.58
CLIP1P30622 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CLIP1P30622 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
CLIP1P30622 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CLIP1P30622 FSCN1P1-201ENST00000568912 1481 ntBASIC31.14■■■□□ 2.58
CLIP1P30622 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CLIP1P30622 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC31.14■■■□□ 2.58
CLIP1P30622 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CLIP1P30622 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
CLIP1P30622 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
CLIP1P30622 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CLIP1P30622 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC31.14■■■□□ 2.58
CLIP1P30622 FITM1-202ENST00000559294 800 ntBASIC31.14■■■□□ 2.58
CLIP1P30622 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
CLIP1P30622 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CLIP1P30622 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CLIP1P30622 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
CLIP1P30622 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CLIP1P30622 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CLIP1P30622 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
CLIP1P30622 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CLIP1P30622 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CLIP1P30622 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CLIP1P30622 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC31.12■■■□□ 2.57
CLIP1P30622 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CLIP1P30622 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
CLIP1P30622 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
CLIP1P30622 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CLIP1P30622 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CLIP1P30622 AC131212.4-201ENST00000623606 975 ntBASIC31.12■■■□□ 2.57
CLIP1P30622 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
CLIP1P30622 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CLIP1P30622 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
CLIP1P30622 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC31.11■■■□□ 2.57
CLIP1P30622 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
CLIP1P30622 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
CLIP1P30622 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CLIP1P30622 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC31.11■■■□□ 2.57
CLIP1P30622 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC31.11■■■□□ 2.57
CLIP1P30622 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC31.11■■■□□ 2.57
CLIP1P30622 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC31.11■■■□□ 2.57
CLIP1P30622 MIR1238-201ENST00000408483 83 ntBASIC31.11■■■□□ 2.57
CLIP1P30622 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC31.11■■■□□ 2.57
CLIP1P30622 AL445228.2-201ENST00000605589 952 ntBASIC31.11■■■□□ 2.57
CLIP1P30622 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CLIP1P30622 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CLIP1P30622 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CLIP1P30622 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CLIP1P30622 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
CLIP1P30622 LINC01465-201ENST00000408887 1940 ntBASIC31.11■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms