Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
HTR1BP28222 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.51■□□□□ 0.71
HTR1BP28222 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HTR1BP28222 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.51■□□□□ 0.71
HTR1BP28222 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HTR1BP28222 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HTR1BP28222 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
HTR1BP28222 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HTR1BP28222 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
HTR1BP28222 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HTR1BP28222 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HTR1BP28222 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.5■□□□□ 0.71
HTR1BP28222 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.5■□□□□ 0.71
HTR1BP28222 AC018553.1-201ENST00000616682 1458 ntBASIC19.5■□□□□ 0.71
HTR1BP28222 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HTR1BP28222 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HTR1BP28222 AL355355.2-201ENST00000442321 338 ntBASIC19.5■□□□□ 0.71
HTR1BP28222 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.5■□□□□ 0.71
HTR1BP28222 AL353708.3-201ENST00000610272 989 ntBASIC19.5■□□□□ 0.71
HTR1BP28222 AC026471.5-201ENST00000615068 467 ntBASIC19.5■□□□□ 0.71
HTR1BP28222 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
HTR1BP28222 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HTR1BP28222 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.5■□□□□ 0.71
HTR1BP28222 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HTR1BP28222 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.5■□□□□ 0.71
HTR1BP28222 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.5■□□□□ 0.71
HTR1BP28222 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HTR1BP28222 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.5■□□□□ 0.71
HTR1BP28222 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HTR1BP28222 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.5■□□□□ 0.71
HTR1BP28222 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.5■□□□□ 0.71
HTR1BP28222 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HTR1BP28222 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HTR1BP28222 TFP1-202ENST00000475455 1573 ntBASIC19.49■□□□□ 0.71
HTR1BP28222 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HTR1BP28222 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.49■□□□□ 0.71
HTR1BP28222 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HTR1BP28222 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.49■□□□□ 0.71
HTR1BP28222 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HTR1BP28222 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HTR1BP28222 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HTR1BP28222 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.49■□□□□ 0.71
HTR1BP28222 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.49■□□□□ 0.71
HTR1BP28222 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
HTR1BP28222 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
HTR1BP28222 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.49■□□□□ 0.71
HTR1BP28222 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.49■□□□□ 0.71
HTR1BP28222 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
HTR1BP28222 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.49■□□□□ 0.71
HTR1BP28222 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.49■□□□□ 0.71
HTR1BP28222 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.49■□□□□ 0.71
HTR1BP28222 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.49■□□□□ 0.71
HTR1BP28222 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.49■□□□□ 0.71
HTR1BP28222 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HTR1BP28222 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HTR1BP28222 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HTR1BP28222 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.49■□□□□ 0.71
HTR1BP28222 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.49■□□□□ 0.71
HTR1BP28222 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.49■□□□□ 0.71
HTR1BP28222 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
HTR1BP28222 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.49■□□□□ 0.71
HTR1BP28222 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HTR1BP28222 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HTR1BP28222 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
HTR1BP28222 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.48■□□□□ 0.71
HTR1BP28222 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HTR1BP28222 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
HTR1BP28222 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.48■□□□□ 0.71
HTR1BP28222 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.48■□□□□ 0.71
HTR1BP28222 YBX1P10-201ENST00000444752 975 ntBASIC19.48■□□□□ 0.71
HTR1BP28222 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
HTR1BP28222 REXO1L12P-201ENST00000622156 912 ntBASIC19.48■□□□□ 0.71
HTR1BP28222 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.48■□□□□ 0.71
HTR1BP28222 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HTR1BP28222 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
HTR1BP28222 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HTR1BP28222 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.48■□□□□ 0.71
HTR1BP28222 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HTR1BP28222 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.47■□□□□ 0.71
HTR1BP28222 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
HTR1BP28222 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HTR1BP28222 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HTR1BP28222 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.47■□□□□ 0.71
HTR1BP28222 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
HTR1BP28222 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HTR1BP28222 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.47■□□□□ 0.71
HTR1BP28222 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HTR1BP28222 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HTR1BP28222 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.47■□□□□ 0.71
HTR1BP28222 FAM197Y1-201ENST00000421178 764 ntBASIC19.47■□□□□ 0.71
HTR1BP28222 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.47■□□□□ 0.71
HTR1BP28222 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.47■□□□□ 0.71
HTR1BP28222 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.47■□□□□ 0.71
HTR1BP28222 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.47■□□□□ 0.71
HTR1BP28222 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HTR1BP28222 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.47■□□□□ 0.71
HTR1BP28222 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.47■□□□□ 0.71
HTR1BP28222 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
HTR1BP28222 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HTR1BP28222 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms