Protein–RNA interactions for Protein: P25440

BRD2, Bromodomain-containing protein 2, humanhuman

Known RBP Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2P25440 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BRD2P25440 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
BRD2P25440 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
BRD2P25440 TFP1-202ENST00000475455 1573 ntBASIC20.99■□□□□ 0.95
BRD2P25440 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.99■□□□□ 0.95
BRD2P25440 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
BRD2P25440 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.99■□□□□ 0.95
BRD2P25440 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.99■□□□□ 0.95
BRD2P25440 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.99■□□□□ 0.95
BRD2P25440 AC233263.1-201ENST00000578059 224 ntBASIC20.99■□□□□ 0.95
BRD2P25440 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
BRD2P25440 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BRD2P25440 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
BRD2P25440 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.99■□□□□ 0.95
BRD2P25440 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC20.99■□□□□ 0.95
BRD2P25440 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BRD2P25440 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
BRD2P25440 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
BRD2P25440 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
BRD2P25440 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
BRD2P25440 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BRD2P25440 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
BRD2P25440 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BRD2P25440 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BRD2P25440 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
BRD2P25440 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
BRD2P25440 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.98■□□□□ 0.95
BRD2P25440 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
BRD2P25440 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.98■□□□□ 0.95
BRD2P25440 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.98■□□□□ 0.95
BRD2P25440 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.98■□□□□ 0.95
BRD2P25440 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.98■□□□□ 0.95
BRD2P25440 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.98■□□□□ 0.95
BRD2P25440 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.98■□□□□ 0.95
BRD2P25440 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
BRD2P25440 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
BRD2P25440 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
BRD2P25440 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.98■□□□□ 0.95
BRD2P25440 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BRD2P25440 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BRD2P25440 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
BRD2P25440 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
BRD2P25440 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
BRD2P25440 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
BRD2P25440 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
BRD2P25440 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.98■□□□□ 0.95
BRD2P25440 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BRD2P25440 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BRD2P25440 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
BRD2P25440 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.98■□□□□ 0.95
BRD2P25440 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRD2P25440 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRD2P25440 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRD2P25440 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.97■□□□□ 0.95
BRD2P25440 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRD2P25440 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
BRD2P25440 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
BRD2P25440 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRD2P25440 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
BRD2P25440 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRD2P25440 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRD2P25440 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
BRD2P25440 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.97■□□□□ 0.95
BRD2P25440 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.97■□□□□ 0.95
BRD2P25440 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
BRD2P25440 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
BRD2P25440 AL121906.2-201ENST00000621597 723 ntBASIC20.97■□□□□ 0.95
BRD2P25440 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRD2P25440 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
BRD2P25440 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.97■□□□□ 0.95
BRD2P25440 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.97■□□□□ 0.95
BRD2P25440 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRD2P25440 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRD2P25440 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRD2P25440 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRD2P25440 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
BRD2P25440 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRD2P25440 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
BRD2P25440 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRD2P25440 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.97■□□□□ 0.95
BRD2P25440 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
BRD2P25440 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BRD2P25440 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BRD2P25440 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BRD2P25440 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRD2P25440 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BRD2P25440 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRD2P25440 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BRD2P25440 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.96■□□□□ 0.95
BRD2P25440 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.96■□□□□ 0.95
BRD2P25440 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRD2P25440 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.96■□□□□ 0.95
BRD2P25440 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
BRD2P25440 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRD2P25440 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
BRD2P25440 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
BRD2P25440 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.96■□□□□ 0.95
BRD2P25440 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BRD2P25440 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BRD2P25440 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms