Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
KCNA3P22001 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
KCNA3P22001 KRT16P6-202ENST00000425692 1426 ntBASIC24.13■■□□□ 1.45
KCNA3P22001 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
KCNA3P22001 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
KCNA3P22001 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
KCNA3P22001 GCSHP2-201ENST00000560971 527 ntBASIC24.13■■□□□ 1.45
KCNA3P22001 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
KCNA3P22001 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
KCNA3P22001 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
KCNA3P22001 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
KCNA3P22001 Z98882.1-201ENST00000622160 2253 ntBASIC24.13■■□□□ 1.45
KCNA3P22001 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC24.13■■□□□ 1.45
KCNA3P22001 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
KCNA3P22001 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC24.13■■□□□ 1.45
KCNA3P22001 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
KCNA3P22001 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
KCNA3P22001 DPP3P2-201ENST00000416030 1696 ntBASIC24.12■■□□□ 1.45
KCNA3P22001 KRT8P10-201ENST00000450021 1447 ntBASIC24.12■■□□□ 1.45
KCNA3P22001 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC24.12■■□□□ 1.45
KCNA3P22001 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
KCNA3P22001 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
KCNA3P22001 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC24.12■■□□□ 1.45
KCNA3P22001 GPALPP1-207ENST00000611650 899 ntBASIC24.12■■□□□ 1.45
KCNA3P22001 AC006538.3-201ENST00000612495 578 ntBASIC24.12■■□□□ 1.45
KCNA3P22001 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
KCNA3P22001 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC24.12■■□□□ 1.45
KCNA3P22001 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
KCNA3P22001 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC24.12■■□□□ 1.45
KCNA3P22001 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
KCNA3P22001 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
KCNA3P22001 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
KCNA3P22001 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
KCNA3P22001 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
KCNA3P22001 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
KCNA3P22001 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC24.11■■□□□ 1.45
KCNA3P22001 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
KCNA3P22001 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
KCNA3P22001 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC24.11■■□□□ 1.45
KCNA3P22001 SPDYE15P-201ENST00000424157 909 ntBASIC24.11■■□□□ 1.45
KCNA3P22001 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC24.11■■□□□ 1.45
KCNA3P22001 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC24.11■■□□□ 1.45
KCNA3P22001 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC24.11■■□□□ 1.45
KCNA3P22001 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC24.11■■□□□ 1.45
KCNA3P22001 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC24.11■■□□□ 1.45
KCNA3P22001 MIR3652-201ENST00000579335 131 ntBASIC24.11■■□□□ 1.45
KCNA3P22001 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
KCNA3P22001 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC24.11■■□□□ 1.45
KCNA3P22001 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
KCNA3P22001 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
KCNA3P22001 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
KCNA3P22001 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC24.1■■□□□ 1.45
KCNA3P22001 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
KCNA3P22001 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
KCNA3P22001 AC004263.2-201ENST00000617183 678 ntBASIC24.1■■□□□ 1.45
KCNA3P22001 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
KCNA3P22001 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
KCNA3P22001 TMEM179-206ENST00000616017 1645 ntBASIC24.1■■□□□ 1.45
KCNA3P22001 PHGDH-210ENST00000641115 1638 ntBASIC24.1■■□□□ 1.45
KCNA3P22001 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC24.1■■□□□ 1.45
KCNA3P22001 AP000523.1-201ENST00000398242 1049 ntBASIC24.09■■□□□ 1.45
KCNA3P22001 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
KCNA3P22001 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
KCNA3P22001 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC24.09■■□□□ 1.45
KCNA3P22001 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC24.09■■□□□ 1.45
KCNA3P22001 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
KCNA3P22001 CKBP1-201ENST00000565489 1086 ntBASIC24.09■■□□□ 1.45
KCNA3P22001 AC023511.2-201ENST00000618803 211 ntBASIC24.09■■□□□ 1.45
KCNA3P22001 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC24.09■■□□□ 1.45
KCNA3P22001 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
KCNA3P22001 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
KCNA3P22001 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
KCNA3P22001 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
KCNA3P22001 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
KCNA3P22001 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
KCNA3P22001 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC24.08■■□□□ 1.45
KCNA3P22001 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
KCNA3P22001 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC24.08■■□□□ 1.45
KCNA3P22001 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC24.08■■□□□ 1.45
KCNA3P22001 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC24.08■■□□□ 1.45
KCNA3P22001 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
KCNA3P22001 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC24.08■■□□□ 1.45
KCNA3P22001 PLK5-205ENST00000642079 1969 ntBASIC24.08■■□□□ 1.45
KCNA3P22001 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC24.08■■□□□ 1.44
KCNA3P22001 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC24.08■■□□□ 1.44
KCNA3P22001 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC24.08■■□□□ 1.44
KCNA3P22001 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
KCNA3P22001 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
KCNA3P22001 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC24.07■■□□□ 1.44
KCNA3P22001 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.07■■□□□ 1.44
KCNA3P22001 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
KCNA3P22001 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC24.07■■□□□ 1.44
KCNA3P22001 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
KCNA3P22001 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
KCNA3P22001 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
KCNA3P22001 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC24.07■■□□□ 1.44
KCNA3P22001 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC24.07■■□□□ 1.44
KCNA3P22001 PRELID1P1-202ENST00000567272 903 ntBASIC24.07■■□□□ 1.44
KCNA3P22001 NEK4P2-201ENST00000580004 1012 ntBASIC24.07■■□□□ 1.44
KCNA3P22001 MIR3180-1-201ENST00000580374 94 ntBASIC24.07■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms