Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PRKCAP17252 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRKCAP17252 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
PRKCAP17252 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRKCAP17252 TCF3P1-201ENST00000423021 1937 ntBASIC18.1■□□□□ 0.49
PRKCAP17252 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.09■□□□□ 0.49
PRKCAP17252 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.09■□□□□ 0.49
PRKCAP17252 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.09■□□□□ 0.49
PRKCAP17252 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRKCAP17252 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRKCAP17252 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PRKCAP17252 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PRKCAP17252 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRKCAP17252 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.09■□□□□ 0.49
PRKCAP17252 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.09■□□□□ 0.49
PRKCAP17252 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.09■□□□□ 0.49
PRKCAP17252 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.09■□□□□ 0.49
PRKCAP17252 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.09■□□□□ 0.49
PRKCAP17252 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.09■□□□□ 0.49
PRKCAP17252 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRKCAP17252 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.09■□□□□ 0.49
PRKCAP17252 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRKCAP17252 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PRKCAP17252 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRKCAP17252 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.09■□□□□ 0.49
PRKCAP17252 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PRKCAP17252 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.08■□□□□ 0.49
PRKCAP17252 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PRKCAP17252 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.08■□□□□ 0.49
PRKCAP17252 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
PRKCAP17252 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.08■□□□□ 0.49
PRKCAP17252 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
PRKCAP17252 AL691432.2-201ENST00000607222 2038 ntBASIC18.08■□□□□ 0.49
PRKCAP17252 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PRKCAP17252 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
PRKCAP17252 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
PRKCAP17252 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PRKCAP17252 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.08■□□□□ 0.49
PRKCAP17252 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.08■□□□□ 0.49
PRKCAP17252 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PRKCAP17252 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.08■□□□□ 0.48
PRKCAP17252 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRKCAP17252 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRKCAP17252 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRKCAP17252 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.08■□□□□ 0.48
PRKCAP17252 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PRKCAP17252 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.08■□□□□ 0.48
PRKCAP17252 KRT18P6-201ENST00000555540 1265 ntBASIC18.08■□□□□ 0.48
PRKCAP17252 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.08■□□□□ 0.48
PRKCAP17252 AC006557.6-201ENST00000623071 864 ntBASIC18.08■□□□□ 0.48
PRKCAP17252 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRKCAP17252 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRKCAP17252 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRKCAP17252 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PRKCAP17252 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRKCAP17252 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.08■□□□□ 0.48
PRKCAP17252 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRKCAP17252 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PRKCAP17252 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRKCAP17252 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.08■□□□□ 0.48
PRKCAP17252 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.08■□□□□ 0.48
PRKCAP17252 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PRKCAP17252 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRKCAP17252 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRKCAP17252 LTB4R2-202ENST00000528054 3092 ntBASIC18.07■□□□□ 0.48
PRKCAP17252 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRKCAP17252 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRKCAP17252 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PRKCAP17252 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRKCAP17252 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRKCAP17252 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.07■□□□□ 0.48
PRKCAP17252 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PRKCAP17252 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRKCAP17252 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRKCAP17252 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PRKCAP17252 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRKCAP17252 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRKCAP17252 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.07■□□□□ 0.48
PRKCAP17252 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.07■□□□□ 0.48
PRKCAP17252 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.07■□□□□ 0.48
PRKCAP17252 RNA5SP413-201ENST00000516373 109 ntBASIC18.07■□□□□ 0.48
PRKCAP17252 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.07■□□□□ 0.48
PRKCAP17252 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PRKCAP17252 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.07■□□□□ 0.48
PRKCAP17252 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PRKCAP17252 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRKCAP17252 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.07■□□□□ 0.48
PRKCAP17252 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
PRKCAP17252 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRKCAP17252 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PRKCAP17252 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PRKCAP17252 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
PRKCAP17252 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRKCAP17252 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PRKCAP17252 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PRKCAP17252 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRKCAP17252 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.06■□□□□ 0.48
PRKCAP17252 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.06■□□□□ 0.48
PRKCAP17252 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRKCAP17252 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms