Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC113410.3-201ENST00000623366 203 ntBASIC17.82■□□□□ 0.44
FREM3P0C091 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FREM3P0C091 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
FREM3P0C091 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.82■□□□□ 0.44
FREM3P0C091 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.82■□□□□ 0.44
FREM3P0C091 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.82■□□□□ 0.44
FREM3P0C091 KRT16P1-201ENST00000399124 1418 ntBASIC17.82■□□□□ 0.44
FREM3P0C091 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FREM3P0C091 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FREM3P0C091 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FREM3P0C091 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FREM3P0C091 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FREM3P0C091 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.82■□□□□ 0.44
FREM3P0C091 AC125437.2-201ENST00000625180 2167 ntBASIC17.81■□□□□ 0.44
FREM3P0C091 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.81■□□□□ 0.44
FREM3P0C091 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FREM3P0C091 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.81■□□□□ 0.44
FREM3P0C091 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.81■□□□□ 0.44
FREM3P0C091 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
FREM3P0C091 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.81■□□□□ 0.44
FREM3P0C091 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
FREM3P0C091 KRT8P9-201ENST00000558927 1449 ntBASIC17.81■□□□□ 0.44
FREM3P0C091 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FREM3P0C091 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FREM3P0C091 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FREM3P0C091 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FREM3P0C091 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FREM3P0C091 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FREM3P0C091 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.81■□□□□ 0.44
FREM3P0C091 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FREM3P0C091 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FREM3P0C091 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FREM3P0C091 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
FREM3P0C091 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.81■□□□□ 0.44
FREM3P0C091 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.81■□□□□ 0.44
FREM3P0C091 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.81■□□□□ 0.44
FREM3P0C091 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.81■□□□□ 0.44
FREM3P0C091 C1QL1P1-201ENST00000568105 661 ntBASIC17.81■□□□□ 0.44
FREM3P0C091 AC233702.5-201ENST00000584107 538 ntBASIC17.81■□□□□ 0.44
FREM3P0C091 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FREM3P0C091 KRT16P6-202ENST00000425692 1426 ntBASIC17.81■□□□□ 0.44
FREM3P0C091 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.81■□□□□ 0.44
FREM3P0C091 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FREM3P0C091 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FREM3P0C091 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
FREM3P0C091 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
FREM3P0C091 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FREM3P0C091 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
FREM3P0C091 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FREM3P0C091 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FREM3P0C091 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.8■□□□□ 0.44
FREM3P0C091 CD177P1-201ENST00000606252 935 ntBASIC17.8■□□□□ 0.44
FREM3P0C091 REXO1L10P-201ENST00000615707 1290 ntBASIC17.8■□□□□ 0.44
FREM3P0C091 REXO1L12P-201ENST00000622156 912 ntBASIC17.8■□□□□ 0.44
FREM3P0C091 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.8■□□□□ 0.44
FREM3P0C091 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.8■□□□□ 0.44
FREM3P0C091 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FREM3P0C091 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
FREM3P0C091 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FREM3P0C091 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FREM3P0C091 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FREM3P0C091 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
FREM3P0C091 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.8■□□□□ 0.44
FREM3P0C091 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FREM3P0C091 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
FREM3P0C091 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FREM3P0C091 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.8■□□□□ 0.44
FREM3P0C091 HLA-G-202ENST00000376815 851 ntBASIC17.8■□□□□ 0.44
FREM3P0C091 HLA-G-203ENST00000376818 1127 ntBASIC17.8■□□□□ 0.44
FREM3P0C091 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.8■□□□□ 0.44
FREM3P0C091 NIFKP9-201ENST00000419265 221 ntBASIC17.8■□□□□ 0.44
FREM3P0C091 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FREM3P0C091 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FREM3P0C091 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
FREM3P0C091 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.8■□□□□ 0.44
FREM3P0C091 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FREM3P0C091 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
FREM3P0C091 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FREM3P0C091 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FREM3P0C091 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.79■□□□□ 0.44
FREM3P0C091 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
FREM3P0C091 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
FREM3P0C091 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FREM3P0C091 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
FREM3P0C091 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FREM3P0C091 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.79■□□□□ 0.44
FREM3P0C091 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FREM3P0C091 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FREM3P0C091 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.79■□□□□ 0.44
FREM3P0C091 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FREM3P0C091 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
FREM3P0C091 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FREM3P0C091 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FREM3P0C091 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
FREM3P0C091 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FREM3P0C091 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FREM3P0C091 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.79■□□□□ 0.44
FREM3P0C091 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
FREM3P0C091 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
FREM3P0C091 AL390955.1-201ENST00000428694 934 ntBASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms