Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.3■□□□□ 0.84
CD48P09326 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CD48P09326 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CD48P09326 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.3■□□□□ 0.84
CD48P09326 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CD48P09326 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CD48P09326 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CD48P09326 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CD48P09326 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CD48P09326 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CD48P09326 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CD48P09326 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD48P09326 AL032819.2-201ENST00000624543 2162 ntBASIC20.29■□□□□ 0.84
CD48P09326 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD48P09326 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CD48P09326 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CD48P09326 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.29■□□□□ 0.84
CD48P09326 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD48P09326 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD48P09326 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD48P09326 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CD48P09326 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CD48P09326 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.29■□□□□ 0.84
CD48P09326 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.29■□□□□ 0.84
CD48P09326 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.29■□□□□ 0.84
CD48P09326 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.29■□□□□ 0.84
CD48P09326 UNC93B4-201ENST00000505679 747 ntBASIC20.29■□□□□ 0.84
CD48P09326 UNC93B5-201ENST00000530315 699 ntBASIC20.29■□□□□ 0.84
CD48P09326 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.29■□□□□ 0.84
CD48P09326 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.29■□□□□ 0.84
CD48P09326 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD48P09326 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD48P09326 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD48P09326 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD48P09326 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD48P09326 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD48P09326 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.29■□□□□ 0.84
CD48P09326 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD48P09326 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD48P09326 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.29■□□□□ 0.84
CD48P09326 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.29■□□□□ 0.84
CD48P09326 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CD48P09326 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.28■□□□□ 0.84
CD48P09326 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CD48P09326 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.28■□□□□ 0.84
CD48P09326 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
CD48P09326 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CD48P09326 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CD48P09326 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.28■□□□□ 0.84
CD48P09326 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.28■□□□□ 0.84
CD48P09326 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.28■□□□□ 0.84
CD48P09326 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.28■□□□□ 0.84
CD48P09326 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.28■□□□□ 0.84
CD48P09326 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.28■□□□□ 0.84
CD48P09326 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.28■□□□□ 0.84
CD48P09326 AC008403.3-201ENST00000598924 454 ntBASIC20.28■□□□□ 0.84
CD48P09326 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.28■□□□□ 0.84
CD48P09326 AL121906.2-201ENST00000621597 723 ntBASIC20.28■□□□□ 0.84
CD48P09326 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CD48P09326 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CD48P09326 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CD48P09326 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CD48P09326 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.28■□□□□ 0.84
CD48P09326 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CD48P09326 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.28■□□□□ 0.84
CD48P09326 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CD48P09326 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CD48P09326 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CD48P09326 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CD48P09326 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.27■□□□□ 0.84
CD48P09326 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.27■□□□□ 0.84
CD48P09326 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
CD48P09326 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.27■□□□□ 0.84
CD48P09326 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CD48P09326 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.27■□□□□ 0.84
CD48P09326 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CD48P09326 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.27■□□□□ 0.84
CD48P09326 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CD48P09326 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CD48P09326 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CD48P09326 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
CD48P09326 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.27■□□□□ 0.84
CD48P09326 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
CD48P09326 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.27■□□□□ 0.84
CD48P09326 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CD48P09326 RNA5SP413-201ENST00000516373 109 ntBASIC20.27■□□□□ 0.84
CD48P09326 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CD48P09326 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CD48P09326 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CD48P09326 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CD48P09326 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.27■□□□□ 0.84
CD48P09326 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CD48P09326 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
CD48P09326 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CD48P09326 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CD48P09326 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.27■□□□□ 0.83
CD48P09326 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CD48P09326 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CD48P09326 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CD48P09326 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms