Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CAPNS1P04632 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.48■□□□□ 0.71
CAPNS1P04632 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.48■□□□□ 0.71
CAPNS1P04632 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.48■□□□□ 0.71
CAPNS1P04632 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.48■□□□□ 0.71
CAPNS1P04632 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.48■□□□□ 0.71
CAPNS1P04632 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.48■□□□□ 0.71
CAPNS1P04632 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.48■□□□□ 0.71
CAPNS1P04632 AC087633.2-202ENST00000565166 1439 ntBASIC19.48■□□□□ 0.71
CAPNS1P04632 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CAPNS1P04632 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CAPNS1P04632 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CAPNS1P04632 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CAPNS1P04632 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CAPNS1P04632 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CAPNS1P04632 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CAPNS1P04632 TNXA-203ENST00000507684 2038 ntBASIC19.47■□□□□ 0.71
CAPNS1P04632 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CAPNS1P04632 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.47■□□□□ 0.71
CAPNS1P04632 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.47■□□□□ 0.71
CAPNS1P04632 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CAPNS1P04632 TCF3P1-201ENST00000423021 1937 ntBASIC19.47■□□□□ 0.71
CAPNS1P04632 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CAPNS1P04632 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.47■□□□□ 0.71
CAPNS1P04632 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CAPNS1P04632 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CAPNS1P04632 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CAPNS1P04632 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.47■□□□□ 0.71
CAPNS1P04632 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CAPNS1P04632 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.47■□□□□ 0.71
CAPNS1P04632 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CAPNS1P04632 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CAPNS1P04632 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CAPNS1P04632 AC105020.6-201ENST00000621523 1217 ntBASIC19.47■□□□□ 0.71
CAPNS1P04632 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CAPNS1P04632 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
CAPNS1P04632 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
CAPNS1P04632 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CAPNS1P04632 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CAPNS1P04632 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CAPNS1P04632 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CAPNS1P04632 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CAPNS1P04632 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
CAPNS1P04632 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
CAPNS1P04632 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CAPNS1P04632 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CAPNS1P04632 AC125437.2-201ENST00000625180 2167 ntBASIC19.46■□□□□ 0.71
CAPNS1P04632 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.46■□□□□ 0.71
CAPNS1P04632 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CAPNS1P04632 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CAPNS1P04632 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CAPNS1P04632 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.46■□□□□ 0.71
CAPNS1P04632 AL355355.2-201ENST00000442321 338 ntBASIC19.46■□□□□ 0.71
CAPNS1P04632 KRT18P57-201ENST00000443599 1254 ntBASIC19.46■□□□□ 0.71
CAPNS1P04632 AC104076.2-201ENST00000448912 469 ntBASIC19.46■□□□□ 0.71
CAPNS1P04632 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.46■□□□□ 0.71
CAPNS1P04632 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.46■□□□□ 0.71
CAPNS1P04632 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.46■□□□□ 0.71
CAPNS1P04632 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.46■□□□□ 0.71
CAPNS1P04632 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CAPNS1P04632 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CAPNS1P04632 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CAPNS1P04632 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CAPNS1P04632 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CAPNS1P04632 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CAPNS1P04632 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.46■□□□□ 0.71
CAPNS1P04632 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.46■□□□□ 0.71
CAPNS1P04632 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CAPNS1P04632 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
CAPNS1P04632 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.45■□□□□ 0.7
CAPNS1P04632 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CAPNS1P04632 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CAPNS1P04632 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CAPNS1P04632 TERF1P1-201ENST00000311003 1181 ntBASIC19.45■□□□□ 0.7
CAPNS1P04632 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CAPNS1P04632 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.45■□□□□ 0.7
CAPNS1P04632 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.45■□□□□ 0.7
CAPNS1P04632 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CAPNS1P04632 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CAPNS1P04632 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CAPNS1P04632 DUX4L26-201ENST00000489078 1255 ntBASIC19.45■□□□□ 0.7
CAPNS1P04632 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.45■□□□□ 0.7
CAPNS1P04632 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.45■□□□□ 0.7
CAPNS1P04632 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CAPNS1P04632 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CAPNS1P04632 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CAPNS1P04632 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CAPNS1P04632 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CAPNS1P04632 CYP21A1P-202ENST00000354927 1481 ntBASIC19.45■□□□□ 0.7
CAPNS1P04632 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
CAPNS1P04632 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
CAPNS1P04632 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CAPNS1P04632 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.45■□□□□ 0.7
CAPNS1P04632 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
CAPNS1P04632 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.45■□□□□ 0.7
CAPNS1P04632 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.45■□□□□ 0.7
CAPNS1P04632 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CAPNS1P04632 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CAPNS1P04632 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CAPNS1P04632 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms