Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 AL049796.1-201ENST00000565336 1766 ntBASIC22.17■■□□□ 1.14
HMGCRP04035 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC22.17■■□□□ 1.14
HMGCRP04035 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
HMGCRP04035 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC22.17■■□□□ 1.14
HMGCRP04035 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
HMGCRP04035 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.17■■□□□ 1.14
HMGCRP04035 KRT16P6-202ENST00000425692 1426 ntBASIC22.17■■□□□ 1.14
HMGCRP04035 BET1L-202ENST00000332865 533 ntTSL 5 BASIC22.17■■□□□ 1.14
HMGCRP04035 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
HMGCRP04035 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC22.17■■□□□ 1.14
HMGCRP04035 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
HMGCRP04035 AL121603.2-201ENST00000557373 2117 ntBASIC22.17■■□□□ 1.14
HMGCRP04035 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
HMGCRP04035 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC22.17■■□□□ 1.14
HMGCRP04035 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC22.17■■□□□ 1.14
HMGCRP04035 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC22.17■■□□□ 1.14
HMGCRP04035 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC22.17■■□□□ 1.14
HMGCRP04035 VPS72-207ENST00000640458 689 ntTSL 5 BASIC22.17■■□□□ 1.14
HMGCRP04035 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC22.17■■□□□ 1.14
HMGCRP04035 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
HMGCRP04035 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
HMGCRP04035 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
HMGCRP04035 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
HMGCRP04035 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
HMGCRP04035 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
HMGCRP04035 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
HMGCRP04035 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC22.16■■□□□ 1.14
HMGCRP04035 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC22.16■■□□□ 1.14
HMGCRP04035 AL359075.1-203ENST00000462729 1002 ntBASIC22.16■■□□□ 1.14
HMGCRP04035 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC22.16■■□□□ 1.14
HMGCRP04035 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HMGCRP04035 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC22.16■■□□□ 1.14
HMGCRP04035 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HMGCRP04035 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC22.16■■□□□ 1.14
HMGCRP04035 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC22.16■■□□□ 1.14
HMGCRP04035 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
HMGCRP04035 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HMGCRP04035 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
HMGCRP04035 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HMGCRP04035 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC22.15■■□□□ 1.14
HMGCRP04035 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HMGCRP04035 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
HMGCRP04035 AC005332.1-201ENST00000577698 1310 ntBASIC22.15■■□□□ 1.14
HMGCRP04035 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HMGCRP04035 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
HMGCRP04035 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC22.15■■□□□ 1.14
HMGCRP04035 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HMGCRP04035 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
HMGCRP04035 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HMGCRP04035 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
HMGCRP04035 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
HMGCRP04035 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
HMGCRP04035 CLEC4GP1-201ENST00000596555 870 ntBASIC22.15■■□□□ 1.14
HMGCRP04035 AC116407.4-201ENST00000623319 1061 ntBASIC22.15■■□□□ 1.14
HMGCRP04035 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HMGCRP04035 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
HMGCRP04035 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
HMGCRP04035 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
HMGCRP04035 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC22.15■■□□□ 1.14
HMGCRP04035 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
HMGCRP04035 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
HMGCRP04035 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
HMGCRP04035 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC22.14■■□□□ 1.13
HMGCRP04035 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC22.14■■□□□ 1.13
HMGCRP04035 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
HMGCRP04035 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
HMGCRP04035 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC22.13■■□□□ 1.13
HMGCRP04035 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.13■■□□□ 1.13
HMGCRP04035 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
HMGCRP04035 DAP-202ENST00000432074 1048 ntTSL 2 BASIC22.13■■□□□ 1.13
HMGCRP04035 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
HMGCRP04035 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC22.13■■□□□ 1.13
HMGCRP04035 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
HMGCRP04035 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC22.13■■□□□ 1.13
HMGCRP04035 AL353719.1-201ENST00000566847 864 ntBASIC22.13■■□□□ 1.13
HMGCRP04035 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC22.13■■□□□ 1.13
HMGCRP04035 NDUFV2-AS1-203ENST00000608008 779 ntBASIC22.13■■□□□ 1.13
HMGCRP04035 AC069148.1-201ENST00000608741 768 ntBASIC22.13■■□□□ 1.13
HMGCRP04035 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC22.13■■□□□ 1.13
HMGCRP04035 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
HMGCRP04035 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
HMGCRP04035 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC22.13■■□□□ 1.13
HMGCRP04035 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
HMGCRP04035 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
HMGCRP04035 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
HMGCRP04035 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
HMGCRP04035 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC22.13■■□□□ 1.13
HMGCRP04035 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
HMGCRP04035 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC22.13■■□□□ 1.13
HMGCRP04035 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
HMGCRP04035 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
HMGCRP04035 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
HMGCRP04035 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.12■■□□□ 1.13
HMGCRP04035 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
HMGCRP04035 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
HMGCRP04035 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC22.12■■□□□ 1.13
HMGCRP04035 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
HMGCRP04035 AL441883.1-201ENST00000566170 1045 ntBASIC22.12■■□□□ 1.13
HMGCRP04035 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC22.12■■□□□ 1.13
HMGCRP04035 AC140113.3-201ENST00000605663 199 ntBASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms