Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
OPN1SWP03999 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
OPN1SWP03999 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
OPN1SWP03999 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
OPN1SWP03999 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
OPN1SWP03999 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
OPN1SWP03999 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
OPN1SWP03999 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
OPN1SWP03999 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.28■□□□□ 0.52
OPN1SWP03999 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
OPN1SWP03999 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
OPN1SWP03999 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
OPN1SWP03999 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
OPN1SWP03999 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
OPN1SWP03999 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
OPN1SWP03999 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
OPN1SWP03999 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
OPN1SWP03999 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.28■□□□□ 0.52
OPN1SWP03999 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.28■□□□□ 0.52
OPN1SWP03999 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
OPN1SWP03999 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
OPN1SWP03999 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
OPN1SWP03999 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
OPN1SWP03999 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.28■□□□□ 0.52
OPN1SWP03999 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.28■□□□□ 0.52
OPN1SWP03999 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
OPN1SWP03999 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
OPN1SWP03999 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.28■□□□□ 0.52
OPN1SWP03999 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
OPN1SWP03999 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
OPN1SWP03999 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
OPN1SWP03999 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
OPN1SWP03999 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
OPN1SWP03999 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
OPN1SWP03999 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
OPN1SWP03999 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
OPN1SWP03999 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
OPN1SWP03999 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
OPN1SWP03999 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
OPN1SWP03999 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
OPN1SWP03999 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
OPN1SWP03999 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
OPN1SWP03999 AC023632.3-201ENST00000521633 145 ntBASIC18.27■□□□□ 0.52
OPN1SWP03999 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
OPN1SWP03999 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.27■□□□□ 0.52
OPN1SWP03999 OR10C1-204ENST00000622521 1039 ntBASIC18.27■□□□□ 0.52
OPN1SWP03999 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
OPN1SWP03999 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
OPN1SWP03999 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
OPN1SWP03999 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
OPN1SWP03999 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
OPN1SWP03999 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
OPN1SWP03999 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
OPN1SWP03999 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
OPN1SWP03999 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.26■□□□□ 0.51
OPN1SWP03999 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.26■□□□□ 0.51
OPN1SWP03999 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
OPN1SWP03999 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.26■□□□□ 0.51
OPN1SWP03999 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.26■□□□□ 0.51
OPN1SWP03999 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
OPN1SWP03999 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
OPN1SWP03999 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
OPN1SWP03999 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
OPN1SWP03999 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
OPN1SWP03999 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
OPN1SWP03999 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
OPN1SWP03999 AL162430.1-201ENST00000480705 870 ntBASIC18.26■□□□□ 0.51
OPN1SWP03999 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
OPN1SWP03999 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
OPN1SWP03999 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.26■□□□□ 0.51
OPN1SWP03999 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
OPN1SWP03999 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
OPN1SWP03999 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.26■□□□□ 0.51
OPN1SWP03999 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
OPN1SWP03999 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
OPN1SWP03999 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.26■□□□□ 0.51
OPN1SWP03999 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
OPN1SWP03999 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
OPN1SWP03999 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
OPN1SWP03999 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
OPN1SWP03999 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OPN1SWP03999 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.25■□□□□ 0.51
OPN1SWP03999 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
OPN1SWP03999 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OPN1SWP03999 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
OPN1SWP03999 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.25■□□□□ 0.51
OPN1SWP03999 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
OPN1SWP03999 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OPN1SWP03999 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
OPN1SWP03999 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
OPN1SWP03999 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OPN1SWP03999 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
OPN1SWP03999 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OPN1SWP03999 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.25■□□□□ 0.51
OPN1SWP03999 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
OPN1SWP03999 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
OPN1SWP03999 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OPN1SWP03999 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.25■□□□□ 0.51
OPN1SWP03999 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
OPN1SWP03999 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms