Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.41■□□□□ 0.86
LMNAP02545 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LMNAP02545 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LMNAP02545 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LMNAP02545 UNC93B2-201ENST00000285383 730 ntBASIC20.41■□□□□ 0.86
LMNAP02545 AL353807.1-201ENST00000427475 662 ntBASIC20.41■□□□□ 0.86
LMNAP02545 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.41■□□□□ 0.86
LMNAP02545 RBM17P1-201ENST00000453646 1190 ntBASIC20.41■□□□□ 0.86
LMNAP02545 AC005829.2-201ENST00000571422 1056 ntBASIC20.41■□□□□ 0.86
LMNAP02545 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.41■□□□□ 0.86
LMNAP02545 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LMNAP02545 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.41■□□□□ 0.86
LMNAP02545 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
LMNAP02545 KRT8P9-201ENST00000558927 1449 ntBASIC20.41■□□□□ 0.86
LMNAP02545 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LMNAP02545 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
LMNAP02545 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LMNAP02545 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LMNAP02545 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
LMNAP02545 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
LMNAP02545 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LMNAP02545 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LMNAP02545 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
LMNAP02545 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LMNAP02545 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
LMNAP02545 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LMNAP02545 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LMNAP02545 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LMNAP02545 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.4■□□□□ 0.86
LMNAP02545 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LMNAP02545 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
LMNAP02545 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.4■□□□□ 0.86
LMNAP02545 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
LMNAP02545 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.4■□□□□ 0.86
LMNAP02545 AL121894.2-201ENST00000602977 491 ntBASIC20.4■□□□□ 0.86
LMNAP02545 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LMNAP02545 AC073508.3-201ENST00000619697 1419 ntBASIC20.4■□□□□ 0.86
LMNAP02545 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LMNAP02545 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
LMNAP02545 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LMNAP02545 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.4■□□□□ 0.86
LMNAP02545 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
LMNAP02545 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
LMNAP02545 AC073314.1-201ENST00000568729 2216 ntBASIC20.39■□□□□ 0.86
LMNAP02545 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
LMNAP02545 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.39■□□□□ 0.86
LMNAP02545 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
LMNAP02545 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.39■□□□□ 0.86
LMNAP02545 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
LMNAP02545 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.86
LMNAP02545 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
LMNAP02545 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
LMNAP02545 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LMNAP02545 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
LMNAP02545 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LMNAP02545 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
LMNAP02545 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.39■□□□□ 0.85
LMNAP02545 HTR7P1-201ENST00000538670 1336 ntBASIC20.39■□□□□ 0.85
LMNAP02545 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
LMNAP02545 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
LMNAP02545 FAM197Y1-201ENST00000421178 764 ntBASIC20.39■□□□□ 0.85
LMNAP02545 UPK3BP1-201ENST00000428678 509 ntBASIC20.39■□□□□ 0.85
LMNAP02545 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
LMNAP02545 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LMNAP02545 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.39■□□□□ 0.85
LMNAP02545 NAPSB-206ENST00000562112 1266 ntBASIC20.39■□□□□ 0.85
LMNAP02545 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.39■□□□□ 0.85
LMNAP02545 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.39■□□□□ 0.85
LMNAP02545 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.39■□□□□ 0.85
LMNAP02545 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
LMNAP02545 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.39■□□□□ 0.85
LMNAP02545 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
LMNAP02545 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LMNAP02545 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
LMNAP02545 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LMNAP02545 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
LMNAP02545 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LMNAP02545 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LMNAP02545 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LMNAP02545 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.38■□□□□ 0.85
LMNAP02545 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LMNAP02545 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
LMNAP02545 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LMNAP02545 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.38■□□□□ 0.85
LMNAP02545 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.38■□□□□ 0.85
LMNAP02545 AC104076.2-201ENST00000448912 469 ntBASIC20.38■□□□□ 0.85
LMNAP02545 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.38■□□□□ 0.85
LMNAP02545 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.38■□□□□ 0.85
LMNAP02545 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.38■□□□□ 0.85
LMNAP02545 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
LMNAP02545 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.38■□□□□ 0.85
LMNAP02545 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
LMNAP02545 AC079598.2-202ENST00000546624 1451 ntBASIC20.37■□□□□ 0.85
LMNAP02545 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
LMNAP02545 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LMNAP02545 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
LMNAP02545 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
LMNAP02545 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LMNAP02545 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LMNAP02545 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms