Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCAF4O95104 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCAF4O95104 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SCAF4O95104 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCAF4O95104 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCAF4O95104 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCAF4O95104 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.01■□□□□ 0.15
SCAF4O95104 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.01■□□□□ 0.15
SCAF4O95104 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.01■□□□□ 0.15
SCAF4O95104 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.01■□□□□ 0.15
SCAF4O95104 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SCAF4O95104 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.01■□□□□ 0.15
SCAF4O95104 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC16.01■□□□□ 0.15
SCAF4O95104 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.01■□□□□ 0.15
SCAF4O95104 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.01■□□□□ 0.15
SCAF4O95104 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.01■□□□□ 0.15
SCAF4O95104 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCAF4O95104 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCAF4O95104 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SCAF4O95104 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.01■□□□□ 0.15
SCAF4O95104 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
SCAF4O95104 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.01■□□□□ 0.15
SCAF4O95104 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCAF4O95104 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCAF4O95104 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCAF4O95104 TREX1-205ENST00000625293 1783 ntBASIC16■□□□□ 0.15
SCAF4O95104 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16■□□□□ 0.15
SCAF4O95104 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SCAF4O95104 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16■□□□□ 0.15
SCAF4O95104 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16■□□□□ 0.15
SCAF4O95104 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
SCAF4O95104 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SCAF4O95104 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16■□□□□ 0.15
SCAF4O95104 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SCAF4O95104 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16■□□□□ 0.15
SCAF4O95104 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16■□□□□ 0.15
SCAF4O95104 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16■□□□□ 0.15
SCAF4O95104 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16■□□□□ 0.15
SCAF4O95104 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16■□□□□ 0.15
SCAF4O95104 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16■□□□□ 0.15
SCAF4O95104 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SCAF4O95104 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
SCAF4O95104 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SCAF4O95104 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16■□□□□ 0.15
SCAF4O95104 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SCAF4O95104 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16■□□□□ 0.15
SCAF4O95104 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16■□□□□ 0.15
SCAF4O95104 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16■□□□□ 0.15
SCAF4O95104 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC15.99■□□□□ 0.15
SCAF4O95104 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCAF4O95104 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.99■□□□□ 0.15
SCAF4O95104 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCAF4O95104 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
SCAF4O95104 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCAF4O95104 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCAF4O95104 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCAF4O95104 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.99■□□□□ 0.15
SCAF4O95104 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.99■□□□□ 0.15
SCAF4O95104 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
SCAF4O95104 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC15.99■□□□□ 0.15
SCAF4O95104 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCAF4O95104 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
SCAF4O95104 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCAF4O95104 STK25-204ENST00000405585 1643 ntTSL 2 BASIC15.99■□□□□ 0.15
SCAF4O95104 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC15.99■□□□□ 0.15
SCAF4O95104 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCAF4O95104 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC15.99■□□□□ 0.15
SCAF4O95104 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SCAF4O95104 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC15.99■□□□□ 0.15
SCAF4O95104 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SCAF4O95104 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SCAF4O95104 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCAF4O95104 AC005332.8-201ENST00000622750 2735 ntBASIC15.99■□□□□ 0.15
SCAF4O95104 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.99■□□□□ 0.15
SCAF4O95104 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCAF4O95104 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.99■□□□□ 0.15
SCAF4O95104 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCAF4O95104 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCAF4O95104 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC15.99■□□□□ 0.15
SCAF4O95104 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.98■□□□□ 0.15
SCAF4O95104 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCAF4O95104 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SCAF4O95104 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SCAF4O95104 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SCAF4O95104 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
SCAF4O95104 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCAF4O95104 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCAF4O95104 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCAF4O95104 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCAF4O95104 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SCAF4O95104 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SCAF4O95104 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
SCAF4O95104 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SCAF4O95104 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC15.98■□□□□ 0.15
SCAF4O95104 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC15.98■□□□□ 0.15
SCAF4O95104 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
SCAF4O95104 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SCAF4O95104 AL691432.2-201ENST00000607222 2038 ntBASIC15.98■□□□□ 0.15
SCAF4O95104 AC104187.1-201ENST00000607510 612 ntBASIC15.98■□□□□ 0.15
SCAF4O95104 AC009237.14-201ENST00000609975 1594 ntBASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms