Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NKX2-2O95096 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
NKX2-2O95096 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NKX2-2O95096 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NKX2-2O95096 AC093484.2-201ENST00000580996 2166 ntBASIC18.11■□□□□ 0.49
NKX2-2O95096 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.11■□□□□ 0.49
NKX2-2O95096 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NKX2-2O95096 AC116562.4-201ENST00000641316 2276 ntBASIC18.1■□□□□ 0.49
NKX2-2O95096 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NKX2-2O95096 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.1■□□□□ 0.49
NKX2-2O95096 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.1■□□□□ 0.49
NKX2-2O95096 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NKX2-2O95096 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NKX2-2O95096 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
NKX2-2O95096 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NKX2-2O95096 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NKX2-2O95096 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NKX2-2O95096 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NKX2-2O95096 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.1■□□□□ 0.49
NKX2-2O95096 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.1■□□□□ 0.49
NKX2-2O95096 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.1■□□□□ 0.49
NKX2-2O95096 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.1■□□□□ 0.49
NKX2-2O95096 CD99P1-205ENST00000527459 561 ntBASIC18.1■□□□□ 0.49
NKX2-2O95096 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.1■□□□□ 0.49
NKX2-2O95096 MTDHP1-201ENST00000605323 784 ntBASIC18.1■□□□□ 0.49
NKX2-2O95096 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.1■□□□□ 0.49
NKX2-2O95096 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
NKX2-2O95096 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NKX2-2O95096 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
NKX2-2O95096 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NKX2-2O95096 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.1■□□□□ 0.49
NKX2-2O95096 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NKX2-2O95096 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
NKX2-2O95096 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NKX2-2O95096 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NKX2-2O95096 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.09■□□□□ 0.49
NKX2-2O95096 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
NKX2-2O95096 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.09■□□□□ 0.49
NKX2-2O95096 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
NKX2-2O95096 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
NKX2-2O95096 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
NKX2-2O95096 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
NKX2-2O95096 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.09■□□□□ 0.49
NKX2-2O95096 AC233263.1-201ENST00000578059 224 ntBASIC18.09■□□□□ 0.49
NKX2-2O95096 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NKX2-2O95096 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NKX2-2O95096 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NKX2-2O95096 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NKX2-2O95096 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.09■□□□□ 0.49
NKX2-2O95096 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NKX2-2O95096 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NKX2-2O95096 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
NKX2-2O95096 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
NKX2-2O95096 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
NKX2-2O95096 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
NKX2-2O95096 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
NKX2-2O95096 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
NKX2-2O95096 KRT8P8-201ENST00000434750 1448 ntBASIC18.08■□□□□ 0.49
NKX2-2O95096 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NKX2-2O95096 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NKX2-2O95096 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NKX2-2O95096 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NKX2-2O95096 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
NKX2-2O95096 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.08■□□□□ 0.48
NKX2-2O95096 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
NKX2-2O95096 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.08■□□□□ 0.48
NKX2-2O95096 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.08■□□□□ 0.48
NKX2-2O95096 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.08■□□□□ 0.48
NKX2-2O95096 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NKX2-2O95096 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
NKX2-2O95096 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.08■□□□□ 0.48
NKX2-2O95096 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NKX2-2O95096 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
NKX2-2O95096 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
NKX2-2O95096 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NKX2-2O95096 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NKX2-2O95096 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NKX2-2O95096 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.07■□□□□ 0.48
NKX2-2O95096 Z82202.1-201ENST00000623446 1880 ntBASIC18.07■□□□□ 0.48
NKX2-2O95096 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NKX2-2O95096 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NKX2-2O95096 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
NKX2-2O95096 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.07■□□□□ 0.48
NKX2-2O95096 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
NKX2-2O95096 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NKX2-2O95096 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NKX2-2O95096 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NKX2-2O95096 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NKX2-2O95096 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NKX2-2O95096 TUBB8P6-201ENST00000436895 1288 ntBASIC18.07■□□□□ 0.48
NKX2-2O95096 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NKX2-2O95096 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.07■□□□□ 0.48
NKX2-2O95096 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NKX2-2O95096 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.07■□□□□ 0.48
NKX2-2O95096 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
NKX2-2O95096 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NKX2-2O95096 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
NKX2-2O95096 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.07■□□□□ 0.48
NKX2-2O95096 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NKX2-2O95096 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms