Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ALX3O95076 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.27■□□□□ 0.36
ALX3O95076 KRT18P11-201ENST00000435214 1283 ntBASIC17.27■□□□□ 0.36
ALX3O95076 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.27■□□□□ 0.36
ALX3O95076 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.27■□□□□ 0.36
ALX3O95076 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ALX3O95076 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ALX3O95076 AC100791.3-201ENST00000617619 330 ntBASIC17.27■□□□□ 0.36
ALX3O95076 AC010536.3-201ENST00000620306 533 ntBASIC17.27■□□□□ 0.36
ALX3O95076 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ALX3O95076 AC139713.2-201ENST00000641328 2723 ntBASIC17.27■□□□□ 0.36
ALX3O95076 AC125437.2-201ENST00000625180 2167 ntBASIC17.27■□□□□ 0.36
ALX3O95076 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ALX3O95076 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.27■□□□□ 0.35
ALX3O95076 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ALX3O95076 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
ALX3O95076 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
ALX3O95076 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ALX3O95076 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.27■□□□□ 0.35
ALX3O95076 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ALX3O95076 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ALX3O95076 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
ALX3O95076 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.27■□□□□ 0.35
ALX3O95076 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ALX3O95076 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALX3O95076 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALX3O95076 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.26■□□□□ 0.35
ALX3O95076 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALX3O95076 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.26■□□□□ 0.35
ALX3O95076 AL138781.2-201ENST00000617896 1843 ntBASIC17.26■□□□□ 0.35
ALX3O95076 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
ALX3O95076 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ALX3O95076 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALX3O95076 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.26■□□□□ 0.35
ALX3O95076 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALX3O95076 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALX3O95076 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALX3O95076 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ALX3O95076 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALX3O95076 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ALX3O95076 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALX3O95076 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALX3O95076 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ALX3O95076 IKBKGP1-201ENST00000612193 1073 ntBASIC17.26■□□□□ 0.35
ALX3O95076 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
ALX3O95076 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALX3O95076 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ALX3O95076 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ALX3O95076 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.26■□□□□ 0.35
ALX3O95076 AC012313.1-201ENST00000593393 3059 ntBASIC17.26■□□□□ 0.35
ALX3O95076 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALX3O95076 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ALX3O95076 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.26■□□□□ 0.35
ALX3O95076 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALX3O95076 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALX3O95076 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
ALX3O95076 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ALX3O95076 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ALX3O95076 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALX3O95076 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ALX3O95076 AC099398.1-201ENST00000567919 2776 ntBASIC17.25■□□□□ 0.35
ALX3O95076 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ALX3O95076 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.25■□□□□ 0.35
ALX3O95076 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ALX3O95076 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALX3O95076 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALX3O95076 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ALX3O95076 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.25■□□□□ 0.35
ALX3O95076 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
ALX3O95076 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ALX3O95076 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
ALX3O95076 AC013268.1-206ENST00000638368 961 ntBASIC17.25■□□□□ 0.35
ALX3O95076 AC112229.1-201ENST00000639295 961 ntBASIC17.25■□□□□ 0.35
ALX3O95076 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ALX3O95076 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALX3O95076 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALX3O95076 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALX3O95076 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALX3O95076 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ALX3O95076 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
ALX3O95076 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALX3O95076 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALX3O95076 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALX3O95076 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALX3O95076 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALX3O95076 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ALX3O95076 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALX3O95076 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ALX3O95076 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.24■□□□□ 0.35
ALX3O95076 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.24■□□□□ 0.35
ALX3O95076 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.24■□□□□ 0.35
ALX3O95076 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ALX3O95076 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.24■□□□□ 0.35
ALX3O95076 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALX3O95076 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALX3O95076 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
ALX3O95076 PRORSD1P-202ENST00000563365 2154 ntBASIC17.24■□□□□ 0.35
ALX3O95076 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
ALX3O95076 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALX3O95076 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms