Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
BEST1O76090 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BEST1O76090 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BEST1O76090 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BEST1O76090 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BEST1O76090 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.63■□□□□ 0.89
BEST1O76090 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
BEST1O76090 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BEST1O76090 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
BEST1O76090 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
BEST1O76090 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BEST1O76090 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BEST1O76090 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
BEST1O76090 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BEST1O76090 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.62■□□□□ 0.89
BEST1O76090 FAM197Y1-201ENST00000421178 764 ntBASIC20.62■□□□□ 0.89
BEST1O76090 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.62■□□□□ 0.89
BEST1O76090 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.62■□□□□ 0.89
BEST1O76090 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.62■□□□□ 0.89
BEST1O76090 AL353708.3-201ENST00000610272 989 ntBASIC20.62■□□□□ 0.89
BEST1O76090 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.62■□□□□ 0.89
BEST1O76090 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BEST1O76090 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BEST1O76090 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BEST1O76090 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.62■□□□□ 0.89
BEST1O76090 AFG3L1P-217ENST00000557444 2447 ntBASIC20.62■□□□□ 0.89
BEST1O76090 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BEST1O76090 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
BEST1O76090 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BEST1O76090 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BEST1O76090 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.61■□□□□ 0.89
BEST1O76090 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BEST1O76090 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BEST1O76090 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BEST1O76090 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.61■□□□□ 0.89
BEST1O76090 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
BEST1O76090 NIFKP9-201ENST00000419265 221 ntBASIC20.61■□□□□ 0.89
BEST1O76090 AL353807.1-201ENST00000427475 662 ntBASIC20.61■□□□□ 0.89
BEST1O76090 AP002982.1-201ENST00000492365 877 ntBASIC20.61■□□□□ 0.89
BEST1O76090 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.61■□□□□ 0.89
BEST1O76090 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.61■□□□□ 0.89
BEST1O76090 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
BEST1O76090 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.61■□□□□ 0.89
BEST1O76090 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BEST1O76090 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.61■□□□□ 0.89
BEST1O76090 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BEST1O76090 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BEST1O76090 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
BEST1O76090 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BEST1O76090 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BEST1O76090 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BEST1O76090 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BEST1O76090 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
BEST1O76090 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.6■□□□□ 0.89
BEST1O76090 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.6■□□□□ 0.89
BEST1O76090 CD177P1-201ENST00000606252 935 ntBASIC20.6■□□□□ 0.89
BEST1O76090 AC073195.1-201ENST00000607241 877 ntBASIC20.6■□□□□ 0.89
BEST1O76090 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BEST1O76090 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BEST1O76090 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BEST1O76090 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.6■□□□□ 0.89
BEST1O76090 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BEST1O76090 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.6■□□□□ 0.89
BEST1O76090 KRT8P8-201ENST00000434750 1448 ntBASIC20.6■□□□□ 0.89
BEST1O76090 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.6■□□□□ 0.89
BEST1O76090 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BEST1O76090 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BEST1O76090 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BEST1O76090 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BEST1O76090 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.59■□□□□ 0.89
BEST1O76090 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
BEST1O76090 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.59■□□□□ 0.89
BEST1O76090 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
BEST1O76090 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BEST1O76090 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BEST1O76090 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BEST1O76090 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
BEST1O76090 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
BEST1O76090 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.59■□□□□ 0.89
BEST1O76090 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.59■□□□□ 0.89
BEST1O76090 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.59■□□□□ 0.89
BEST1O76090 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.59■□□□□ 0.89
BEST1O76090 AP001412.1-201ENST00000608405 714 ntBASIC20.59■□□□□ 0.89
BEST1O76090 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BEST1O76090 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.59■□□□□ 0.89
BEST1O76090 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
BEST1O76090 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
BEST1O76090 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BEST1O76090 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BEST1O76090 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BEST1O76090 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
BEST1O76090 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
BEST1O76090 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BEST1O76090 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
BEST1O76090 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.58■□□□□ 0.89
BEST1O76090 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.58■□□□□ 0.89
BEST1O76090 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.58■□□□□ 0.89
BEST1O76090 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BEST1O76090 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
BEST1O76090 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms