Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UPK1BO75841 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UPK1BO75841 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
UPK1BO75841 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UPK1BO75841 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
UPK1BO75841 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UPK1BO75841 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UPK1BO75841 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
UPK1BO75841 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.08■□□□□ 0.33
UPK1BO75841 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
UPK1BO75841 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.08■□□□□ 0.33
UPK1BO75841 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
UPK1BO75841 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
UPK1BO75841 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
UPK1BO75841 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
UPK1BO75841 AC008764.6-201ENST00000595909 2069 ntBASIC17.08■□□□□ 0.33
UPK1BO75841 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
UPK1BO75841 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UPK1BO75841 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.08■□□□□ 0.32
UPK1BO75841 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.08■□□□□ 0.32
UPK1BO75841 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UPK1BO75841 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UPK1BO75841 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
UPK1BO75841 MIR3181-201ENST00000578512 73 ntBASIC17.08■□□□□ 0.32
UPK1BO75841 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
UPK1BO75841 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
UPK1BO75841 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UPK1BO75841 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
UPK1BO75841 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
UPK1BO75841 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UPK1BO75841 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
UPK1BO75841 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UPK1BO75841 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.08■□□□□ 0.32
UPK1BO75841 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.08■□□□□ 0.32
UPK1BO75841 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UPK1BO75841 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
UPK1BO75841 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UPK1BO75841 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
UPK1BO75841 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UPK1BO75841 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UPK1BO75841 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UPK1BO75841 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UPK1BO75841 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UPK1BO75841 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.07■□□□□ 0.32
UPK1BO75841 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UPK1BO75841 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.07■□□□□ 0.32
UPK1BO75841 AC010980.1-201ENST00000587192 1142 ntBASIC17.07■□□□□ 0.32
UPK1BO75841 ESPNP-201ENST00000270691 2015 ntBASIC17.07■□□□□ 0.32
UPK1BO75841 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
UPK1BO75841 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.07■□□□□ 0.32
UPK1BO75841 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.07■□□□□ 0.32
UPK1BO75841 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UPK1BO75841 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UPK1BO75841 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UPK1BO75841 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UPK1BO75841 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UPK1BO75841 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UPK1BO75841 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UPK1BO75841 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UPK1BO75841 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UPK1BO75841 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPK1BO75841 AC061975.6-201ENST00000579045 1553 ntBASIC17.06■□□□□ 0.32
UPK1BO75841 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.06■□□□□ 0.32
UPK1BO75841 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPK1BO75841 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UPK1BO75841 PCDHA12-202ENST00000613593 2588 ntBASIC17.06■□□□□ 0.32
UPK1BO75841 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UPK1BO75841 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UPK1BO75841 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
UPK1BO75841 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
UPK1BO75841 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPK1BO75841 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.06■□□□□ 0.32
UPK1BO75841 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.06■□□□□ 0.32
UPK1BO75841 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPK1BO75841 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
UPK1BO75841 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.06■□□□□ 0.32
UPK1BO75841 AP005435.1-201ENST00000529293 1178 ntBASIC17.06■□□□□ 0.32
UPK1BO75841 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPK1BO75841 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPK1BO75841 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPK1BO75841 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.06■□□□□ 0.32
UPK1BO75841 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPK1BO75841 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
UPK1BO75841 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UPK1BO75841 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPK1BO75841 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPK1BO75841 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UPK1BO75841 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.06■□□□□ 0.32
UPK1BO75841 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPK1BO75841 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UPK1BO75841 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPK1BO75841 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPK1BO75841 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1BO75841 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
UPK1BO75841 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
UPK1BO75841 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1BO75841 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1BO75841 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.05■□□□□ 0.32
UPK1BO75841 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.05■□□□□ 0.32
UPK1BO75841 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms