Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LRCH4O75427 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.4■□□□□ 0.86
LRCH4O75427 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRCH4O75427 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
LRCH4O75427 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.4■□□□□ 0.86
LRCH4O75427 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRCH4O75427 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRCH4O75427 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
LRCH4O75427 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
LRCH4O75427 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LRCH4O75427 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
LRCH4O75427 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.39■□□□□ 0.85
LRCH4O75427 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LRCH4O75427 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRCH4O75427 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
LRCH4O75427 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.39■□□□□ 0.85
LRCH4O75427 POM121L13P-201ENST00000422362 380 ntBASIC20.39■□□□□ 0.85
LRCH4O75427 YBX1P10-201ENST00000444752 975 ntBASIC20.39■□□□□ 0.85
LRCH4O75427 RNA5SP413-201ENST00000516373 109 ntBASIC20.39■□□□□ 0.85
LRCH4O75427 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.39■□□□□ 0.85
LRCH4O75427 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.39■□□□□ 0.85
LRCH4O75427 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.39■□□□□ 0.85
LRCH4O75427 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LRCH4O75427 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.39■□□□□ 0.85
LRCH4O75427 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LRCH4O75427 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.39■□□□□ 0.85
LRCH4O75427 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
LRCH4O75427 AL032819.2-201ENST00000624543 2162 ntBASIC20.39■□□□□ 0.85
LRCH4O75427 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
LRCH4O75427 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
LRCH4O75427 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRCH4O75427 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LRCH4O75427 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRCH4O75427 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LRCH4O75427 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LRCH4O75427 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRCH4O75427 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.38■□□□□ 0.85
LRCH4O75427 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRCH4O75427 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRCH4O75427 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.38■□□□□ 0.85
LRCH4O75427 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRCH4O75427 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.38■□□□□ 0.85
LRCH4O75427 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRCH4O75427 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.38■□□□□ 0.85
LRCH4O75427 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRCH4O75427 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRCH4O75427 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.38■□□□□ 0.85
LRCH4O75427 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRCH4O75427 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.38■□□□□ 0.85
LRCH4O75427 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.38■□□□□ 0.85
LRCH4O75427 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRCH4O75427 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.38■□□□□ 0.85
LRCH4O75427 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRCH4O75427 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.38■□□□□ 0.85
LRCH4O75427 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRCH4O75427 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRCH4O75427 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRCH4O75427 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
LRCH4O75427 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRCH4O75427 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.37■□□□□ 0.85
LRCH4O75427 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.37■□□□□ 0.85
LRCH4O75427 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.37■□□□□ 0.85
LRCH4O75427 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRCH4O75427 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRCH4O75427 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.37■□□□□ 0.85
LRCH4O75427 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRCH4O75427 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRCH4O75427 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRCH4O75427 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRCH4O75427 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRCH4O75427 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRCH4O75427 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.37■□□□□ 0.85
LRCH4O75427 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
LRCH4O75427 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.37■□□□□ 0.85
LRCH4O75427 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LRCH4O75427 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.37■□□□□ 0.85
LRCH4O75427 KRT18P6-201ENST00000555540 1265 ntBASIC20.37■□□□□ 0.85
LRCH4O75427 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRCH4O75427 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRCH4O75427 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.37■□□□□ 0.85
LRCH4O75427 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRCH4O75427 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.37■□□□□ 0.85
LRCH4O75427 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRCH4O75427 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.37■□□□□ 0.85
LRCH4O75427 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRCH4O75427 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRCH4O75427 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRCH4O75427 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRCH4O75427 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.37■□□□□ 0.85
LRCH4O75427 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.37■□□□□ 0.85
LRCH4O75427 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LRCH4O75427 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRCH4O75427 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
LRCH4O75427 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.36■□□□□ 0.85
LRCH4O75427 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRCH4O75427 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRCH4O75427 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRCH4O75427 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRCH4O75427 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
LRCH4O75427 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms