Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
URB1O60287 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
URB1O60287 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.51■□□□□ 0.55
URB1O60287 AL671277.2-201ENST00000458060 996 ntBASIC18.51■□□□□ 0.55
URB1O60287 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.51■□□□□ 0.55
URB1O60287 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
URB1O60287 AC141257.4-201ENST00000634557 245 ntBASIC18.51■□□□□ 0.55
URB1O60287 AC136944.6-201ENST00000634818 245 ntBASIC18.51■□□□□ 0.55
URB1O60287 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
URB1O60287 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
URB1O60287 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
URB1O60287 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
URB1O60287 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
URB1O60287 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
URB1O60287 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
URB1O60287 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.51■□□□□ 0.55
URB1O60287 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
URB1O60287 HOMER2P1-201ENST00000455653 964 ntBASIC18.51■□□□□ 0.55
URB1O60287 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
URB1O60287 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
URB1O60287 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
URB1O60287 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.5■□□□□ 0.55
URB1O60287 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
URB1O60287 FBXW4P1-201ENST00000426721 2239 ntBASIC18.5■□□□□ 0.55
URB1O60287 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
URB1O60287 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
URB1O60287 CCR12P-201ENST00000446203 998 ntBASIC18.5■□□□□ 0.55
URB1O60287 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
URB1O60287 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.5■□□□□ 0.55
URB1O60287 AC111152.3-201ENST00000569699 673 ntBASIC18.5■□□□□ 0.55
URB1O60287 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.5■□□□□ 0.55
URB1O60287 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
URB1O60287 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
URB1O60287 AC011484.1-201ENST00000377652 1995 ntBASIC18.5■□□□□ 0.55
URB1O60287 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
URB1O60287 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
URB1O60287 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
URB1O60287 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
URB1O60287 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
URB1O60287 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
URB1O60287 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
URB1O60287 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
URB1O60287 AC096733.2-201ENST00000609937 1394 ntBASIC18.5■□□□□ 0.55
URB1O60287 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
URB1O60287 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
URB1O60287 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
URB1O60287 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
URB1O60287 PVRIG2P-201ENST00000435460 978 ntBASIC18.49■□□□□ 0.55
URB1O60287 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.49■□□□□ 0.55
URB1O60287 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.49■□□□□ 0.55
URB1O60287 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.49■□□□□ 0.55
URB1O60287 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.49■□□□□ 0.55
URB1O60287 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
URB1O60287 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
URB1O60287 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.49■□□□□ 0.55
URB1O60287 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
URB1O60287 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
URB1O60287 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.49■□□□□ 0.55
URB1O60287 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
URB1O60287 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
URB1O60287 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
URB1O60287 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.49■□□□□ 0.55
URB1O60287 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
URB1O60287 AC140113.3-201ENST00000605663 199 ntBASIC18.49■□□□□ 0.55
URB1O60287 AC008622.2-201ENST00000617006 1229 ntBASIC18.49■□□□□ 0.55
URB1O60287 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.49■□□□□ 0.55
URB1O60287 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.49■□□□□ 0.55
URB1O60287 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
URB1O60287 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
URB1O60287 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
URB1O60287 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
URB1O60287 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.49■□□□□ 0.55
URB1O60287 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
URB1O60287 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.48■□□□□ 0.55
URB1O60287 AP000347.1-202ENST00000435868 847 ntBASIC18.48■□□□□ 0.55
URB1O60287 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
URB1O60287 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
URB1O60287 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
URB1O60287 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
URB1O60287 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
URB1O60287 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
URB1O60287 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
URB1O60287 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
URB1O60287 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
URB1O60287 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
URB1O60287 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.48■□□□□ 0.55
URB1O60287 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
URB1O60287 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.48■□□□□ 0.55
URB1O60287 KRT8P45-201ENST00000414328 1447 ntBASIC18.48■□□□□ 0.55
URB1O60287 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
URB1O60287 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
URB1O60287 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
URB1O60287 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
URB1O60287 KRT18P16-201ENST00000510337 1294 ntBASIC18.48■□□□□ 0.55
URB1O60287 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.48■□□□□ 0.55
URB1O60287 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.48■□□□□ 0.55
URB1O60287 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
URB1O60287 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.48■□□□□ 0.55
URB1O60287 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
URB1O60287 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms