Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.6■□□□□ 0.73
LDB2O43679 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LDB2O43679 Z82202.1-201ENST00000623446 1880 ntBASIC19.6■□□□□ 0.73
LDB2O43679 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
LDB2O43679 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LDB2O43679 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.6■□□□□ 0.73
LDB2O43679 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
LDB2O43679 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LDB2O43679 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.6■□□□□ 0.73
LDB2O43679 ESRRAP1-201ENST00000400596 1257 ntBASIC19.6■□□□□ 0.73
LDB2O43679 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.6■□□□□ 0.73
LDB2O43679 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.6■□□□□ 0.73
LDB2O43679 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
LDB2O43679 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.6■□□□□ 0.73
LDB2O43679 AC069544.1-201ENST00000609399 999 ntBASIC19.6■□□□□ 0.73
LDB2O43679 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.6■□□□□ 0.73
LDB2O43679 TMEM191A-211ENST00000637163 1067 ntBASIC19.6■□□□□ 0.73
LDB2O43679 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
LDB2O43679 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
LDB2O43679 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.6■□□□□ 0.73
LDB2O43679 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.6■□□□□ 0.73
LDB2O43679 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.6■□□□□ 0.73
LDB2O43679 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.6■□□□□ 0.73
LDB2O43679 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.6■□□□□ 0.73
LDB2O43679 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.6■□□□□ 0.73
LDB2O43679 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.6■□□□□ 0.73
LDB2O43679 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LDB2O43679 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
LDB2O43679 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LDB2O43679 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LDB2O43679 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LDB2O43679 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LDB2O43679 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
LDB2O43679 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LDB2O43679 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.59■□□□□ 0.73
LDB2O43679 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
LDB2O43679 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LDB2O43679 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LDB2O43679 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LDB2O43679 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LDB2O43679 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.59■□□□□ 0.73
LDB2O43679 KRT17P3-201ENST00000420566 1262 ntBASIC19.59■□□□□ 0.73
LDB2O43679 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.59■□□□□ 0.73
LDB2O43679 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.59■□□□□ 0.73
LDB2O43679 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.59■□□□□ 0.73
LDB2O43679 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LDB2O43679 MTDHP1-201ENST00000605323 784 ntBASIC19.59■□□□□ 0.73
LDB2O43679 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.59■□□□□ 0.73
LDB2O43679 AC007952.6-201ENST00000573168 2673 ntBASIC19.59■□□□□ 0.73
LDB2O43679 AC003957.1-201ENST00000625108 2673 ntBASIC19.59■□□□□ 0.73
LDB2O43679 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LDB2O43679 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LDB2O43679 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LDB2O43679 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LDB2O43679 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.73
LDB2O43679 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LDB2O43679 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
LDB2O43679 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LDB2O43679 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.73
LDB2O43679 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LDB2O43679 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LDB2O43679 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LDB2O43679 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
LDB2O43679 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
LDB2O43679 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LDB2O43679 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LDB2O43679 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
LDB2O43679 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
LDB2O43679 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.58■□□□□ 0.72
LDB2O43679 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
LDB2O43679 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.58■□□□□ 0.72
LDB2O43679 MIR4651-201ENST00000582622 73 ntBASIC19.58■□□□□ 0.72
LDB2O43679 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LDB2O43679 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
LDB2O43679 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
LDB2O43679 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LDB2O43679 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.58■□□□□ 0.72
LDB2O43679 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LDB2O43679 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.58■□□□□ 0.72
LDB2O43679 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LDB2O43679 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LDB2O43679 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LDB2O43679 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LDB2O43679 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LDB2O43679 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
LDB2O43679 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.57■□□□□ 0.72
LDB2O43679 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LDB2O43679 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.57■□□□□ 0.72
LDB2O43679 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.57■□□□□ 0.72
LDB2O43679 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LDB2O43679 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LDB2O43679 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.57■□□□□ 0.72
LDB2O43679 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LDB2O43679 KRT18P16-201ENST00000510337 1294 ntBASIC19.57■□□□□ 0.72
LDB2O43679 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.57■□□□□ 0.72
LDB2O43679 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.57■□□□□ 0.72
LDB2O43679 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.57■□□□□ 0.72
LDB2O43679 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LDB2O43679 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
LDB2O43679 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms