Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC25.01■■□□□ 1.59
ABCC4O15439 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
ABCC4O15439 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
ABCC4O15439 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
ABCC4O15439 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
ABCC4O15439 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC25.01■■□□□ 1.59
ABCC4O15439 HTR7P1-201ENST00000538670 1336 ntBASIC25.01■■□□□ 1.59
ABCC4O15439 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC25.01■■□□□ 1.59
ABCC4O15439 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
ABCC4O15439 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC25.01■■□□□ 1.59
ABCC4O15439 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC25.01■■□□□ 1.59
ABCC4O15439 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC25.01■■□□□ 1.59
ABCC4O15439 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC25.01■■□□□ 1.59
ABCC4O15439 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC25.01■■□□□ 1.59
ABCC4O15439 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
ABCC4O15439 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ABCC4O15439 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC25■■□□□ 1.59
ABCC4O15439 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
ABCC4O15439 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
ABCC4O15439 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC25■■□□□ 1.59
ABCC4O15439 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC25■■□□□ 1.59
ABCC4O15439 AP003071.4-201ENST00000562276 1284 ntBASIC25■■□□□ 1.59
ABCC4O15439 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ABCC4O15439 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
ABCC4O15439 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC25■■□□□ 1.59
ABCC4O15439 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
ABCC4O15439 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
ABCC4O15439 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC24.99■■□□□ 1.59
ABCC4O15439 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
ABCC4O15439 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
ABCC4O15439 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
ABCC4O15439 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC24.99■■□□□ 1.59
ABCC4O15439 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
ABCC4O15439 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC24.99■■□□□ 1.59
ABCC4O15439 KRT16P5-201ENST00000455284 522 ntBASIC24.99■■□□□ 1.59
ABCC4O15439 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC24.99■■□□□ 1.59
ABCC4O15439 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
ABCC4O15439 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC24.99■■□□□ 1.59
ABCC4O15439 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
ABCC4O15439 RPS15-203ENST00000586096 570 ntTSL 2 BASIC24.99■■□□□ 1.59
ABCC4O15439 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
ABCC4O15439 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
ABCC4O15439 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC24.99■■□□□ 1.59
ABCC4O15439 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
ABCC4O15439 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
ABCC4O15439 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ABCC4O15439 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC24.98■■□□□ 1.59
ABCC4O15439 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC24.98■■□□□ 1.59
ABCC4O15439 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
ABCC4O15439 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ABCC4O15439 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC24.98■■□□□ 1.59
ABCC4O15439 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC24.98■■□□□ 1.59
ABCC4O15439 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC24.98■■□□□ 1.59
ABCC4O15439 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC24.98■■□□□ 1.59
ABCC4O15439 PPOX-219ENST00000544598 813 ntTSL 2 BASIC24.98■■□□□ 1.59
ABCC4O15439 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC24.98■■□□□ 1.59
ABCC4O15439 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC24.98■■□□□ 1.59
ABCC4O15439 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC24.98■■□□□ 1.59
ABCC4O15439 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
ABCC4O15439 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
ABCC4O15439 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC24.98■■□□□ 1.59
ABCC4O15439 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ABCC4O15439 NBPF21P-201ENST00000425093 1451 ntBASIC24.98■■□□□ 1.59
ABCC4O15439 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC24.98■■□□□ 1.59
ABCC4O15439 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ABCC4O15439 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC24.98■■□□□ 1.59
ABCC4O15439 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ABCC4O15439 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC24.98■■□□□ 1.59
ABCC4O15439 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
ABCC4O15439 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ABCC4O15439 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
ABCC4O15439 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
ABCC4O15439 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
ABCC4O15439 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
ABCC4O15439 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC24.97■■□□□ 1.59
ABCC4O15439 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
ABCC4O15439 TREX2-204ENST00000370212 861 ntTSL 5 BASIC24.97■■□□□ 1.59
ABCC4O15439 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
ABCC4O15439 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
ABCC4O15439 F2R-202ENST00000505600 442 ntTSL 2 BASIC24.97■■□□□ 1.59
ABCC4O15439 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC24.97■■□□□ 1.59
ABCC4O15439 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC24.97■■□□□ 1.59
ABCC4O15439 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC24.97■■□□□ 1.59
ABCC4O15439 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC24.97■■□□□ 1.59
ABCC4O15439 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC24.97■■□□□ 1.59
ABCC4O15439 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC24.97■■□□□ 1.59
ABCC4O15439 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
ABCC4O15439 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC24.97■■□□□ 1.59
ABCC4O15439 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
ABCC4O15439 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC24.97■■□□□ 1.59
ABCC4O15439 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
ABCC4O15439 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
ABCC4O15439 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
ABCC4O15439 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
ABCC4O15439 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
ABCC4O15439 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC24.96■■□□□ 1.59
ABCC4O15439 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
ABCC4O15439 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
ABCC4O15439 PNN-205ENST00000556530 601 ntTSL 2 BASIC24.96■■□□□ 1.59
ABCC4O15439 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms