Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
ATP2A1O14983 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ATP2A1O14983 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.47■■□□□ 1.19
ATP2A1O14983 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ATP2A1O14983 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
ATP2A1O14983 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
ATP2A1O14983 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ATP2A1O14983 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC22.47■■□□□ 1.19
ATP2A1O14983 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC22.47■■□□□ 1.19
ATP2A1O14983 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC22.47■■□□□ 1.19
ATP2A1O14983 NME1-207ENST00000480143 964 ntTSL 2 BASIC22.47■■□□□ 1.19
ATP2A1O14983 AC097488.1-201ENST00000507834 756 ntBASIC22.47■■□□□ 1.19
ATP2A1O14983 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
ATP2A1O14983 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC22.47■■□□□ 1.19
ATP2A1O14983 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC22.47■■□□□ 1.19
ATP2A1O14983 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
ATP2A1O14983 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
ATP2A1O14983 KRT8P8-201ENST00000434750 1448 ntBASIC22.47■■□□□ 1.19
ATP2A1O14983 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
ATP2A1O14983 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ATP2A1O14983 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC22.46■■□□□ 1.19
ATP2A1O14983 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
ATP2A1O14983 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ATP2A1O14983 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
ATP2A1O14983 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
ATP2A1O14983 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ATP2A1O14983 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC22.46■■□□□ 1.19
ATP2A1O14983 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
ATP2A1O14983 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC22.46■■□□□ 1.19
ATP2A1O14983 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC22.46■■□□□ 1.19
ATP2A1O14983 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
ATP2A1O14983 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
ATP2A1O14983 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
ATP2A1O14983 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.19
ATP2A1O14983 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
ATP2A1O14983 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ATP2A1O14983 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC22.45■■□□□ 1.18
ATP2A1O14983 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
ATP2A1O14983 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC22.45■■□□□ 1.18
ATP2A1O14983 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
ATP2A1O14983 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
ATP2A1O14983 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC22.45■■□□□ 1.18
ATP2A1O14983 AC008040.2-201ENST00000461049 708 ntBASIC22.45■■□□□ 1.18
ATP2A1O14983 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ATP2A1O14983 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
ATP2A1O14983 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ATP2A1O14983 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ATP2A1O14983 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
ATP2A1O14983 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ATP2A1O14983 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC22.45■■□□□ 1.18
ATP2A1O14983 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ATP2A1O14983 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ATP2A1O14983 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
ATP2A1O14983 AC004951.3-201ENST00000418645 1148 ntBASIC22.44■■□□□ 1.18
ATP2A1O14983 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC22.44■■□□□ 1.18
ATP2A1O14983 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
ATP2A1O14983 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC22.44■■□□□ 1.18
ATP2A1O14983 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC22.44■■□□□ 1.18
ATP2A1O14983 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.44■■□□□ 1.18
ATP2A1O14983 AL445228.2-201ENST00000605589 952 ntBASIC22.44■■□□□ 1.18
ATP2A1O14983 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
ATP2A1O14983 AC096733.2-201ENST00000609937 1394 ntBASIC22.44■■□□□ 1.18
ATP2A1O14983 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
ATP2A1O14983 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC22.43■■□□□ 1.18
ATP2A1O14983 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC22.43■■□□□ 1.18
ATP2A1O14983 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ATP2A1O14983 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ATP2A1O14983 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC22.43■■□□□ 1.18
ATP2A1O14983 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
ATP2A1O14983 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC22.43■■□□□ 1.18
ATP2A1O14983 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
ATP2A1O14983 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
ATP2A1O14983 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
ATP2A1O14983 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
ATP2A1O14983 CRYGFP-201ENST00000418459 633 ntBASIC22.43■■□□□ 1.18
ATP2A1O14983 AL137013.1-201ENST00000432946 1228 ntBASIC22.43■■□□□ 1.18
ATP2A1O14983 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC22.43■■□□□ 1.18
ATP2A1O14983 Z85996.1-201ENST00000494644 937 ntBASIC22.43■■□□□ 1.18
ATP2A1O14983 GLRB-205ENST00000512619 728 ntTSL 3 BASIC22.43■■□□□ 1.18
ATP2A1O14983 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC22.43■■□□□ 1.18
ATP2A1O14983 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
ATP2A1O14983 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC22.43■■□□□ 1.18
ATP2A1O14983 AC011298.2-201ENST00000617989 482 ntBASIC22.43■■□□□ 1.18
ATP2A1O14983 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
ATP2A1O14983 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
ATP2A1O14983 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC22.43■■□□□ 1.18
ATP2A1O14983 MOK-225ENST00000522867 1883 ntTSL 5 BASIC22.43■■□□□ 1.18
ATP2A1O14983 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ATP2A1O14983 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
ATP2A1O14983 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
ATP2A1O14983 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
ATP2A1O14983 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC22.42■■□□□ 1.18
ATP2A1O14983 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
ATP2A1O14983 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
ATP2A1O14983 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC22.42■■□□□ 1.18
ATP2A1O14983 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
ATP2A1O14983 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ATP2A1O14983 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC22.42■■□□□ 1.18
ATP2A1O14983 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC22.42■■□□□ 1.18
ATP2A1O14983 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms