Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SOX1O00570 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SOX1O00570 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.94■□□□□ 0.94
SOX1O00570 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SOX1O00570 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.94■□□□□ 0.94
SOX1O00570 RASA4DP-201ENST00000460726 1199 ntBASIC20.94■□□□□ 0.94
SOX1O00570 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.94■□□□□ 0.94
SOX1O00570 KRT18P58-201ENST00000527480 1120 ntBASIC20.94■□□□□ 0.94
SOX1O00570 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.94■□□□□ 0.94
SOX1O00570 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
SOX1O00570 AC027796.2-201ENST00000575326 344 ntBASIC20.94■□□□□ 0.94
SOX1O00570 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SOX1O00570 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.94■□□□□ 0.94
SOX1O00570 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SOX1O00570 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.94■□□□□ 0.94
SOX1O00570 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SOX1O00570 AC080038.3-201ENST00000623346 1952 ntBASIC20.94■□□□□ 0.94
SOX1O00570 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SOX1O00570 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SOX1O00570 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SOX1O00570 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SOX1O00570 MIR564-202ENST00000385049 94 ntBASIC20.93■□□□□ 0.94
SOX1O00570 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.93■□□□□ 0.94
SOX1O00570 AP000867.3-201ENST00000524675 377 ntBASIC20.93■□□□□ 0.94
SOX1O00570 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.93■□□□□ 0.94
SOX1O00570 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.93■□□□□ 0.94
SOX1O00570 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
SOX1O00570 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SOX1O00570 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SOX1O00570 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SOX1O00570 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SOX1O00570 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.93■□□□□ 0.94
SOX1O00570 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SOX1O00570 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SOX1O00570 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SOX1O00570 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SOX1O00570 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.92■□□□□ 0.94
SOX1O00570 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SOX1O00570 BX842568.4-201ENST00000421222 227 ntBASIC20.92■□□□□ 0.94
SOX1O00570 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.92■□□□□ 0.94
SOX1O00570 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.92■□□□□ 0.94
SOX1O00570 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.92■□□□□ 0.94
SOX1O00570 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
SOX1O00570 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SOX1O00570 MIR2861-201ENST00000636310 90 ntBASIC20.92■□□□□ 0.94
SOX1O00570 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SOX1O00570 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SOX1O00570 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.92■□□□□ 0.94
SOX1O00570 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SOX1O00570 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.92■□□□□ 0.94
SOX1O00570 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SOX1O00570 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.92■□□□□ 0.94
SOX1O00570 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SOX1O00570 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SOX1O00570 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.92■□□□□ 0.94
SOX1O00570 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SOX1O00570 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SOX1O00570 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.91■□□□□ 0.94
SOX1O00570 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.91■□□□□ 0.94
SOX1O00570 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
SOX1O00570 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.91■□□□□ 0.94
SOX1O00570 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SOX1O00570 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.91■□□□□ 0.94
SOX1O00570 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SOX1O00570 PMS2P2-201ENST00000425039 1128 ntBASIC20.91■□□□□ 0.94
SOX1O00570 AC005104.2-201ENST00000427818 678 ntBASIC20.91■□□□□ 0.94
SOX1O00570 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.91■□□□□ 0.94
SOX1O00570 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SOX1O00570 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.91■□□□□ 0.94
SOX1O00570 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SOX1O00570 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.91■□□□□ 0.94
SOX1O00570 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.91■□□□□ 0.94
SOX1O00570 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
SOX1O00570 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.91■□□□□ 0.94
SOX1O00570 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SOX1O00570 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SOX1O00570 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.9■□□□□ 0.94
SOX1O00570 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SOX1O00570 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.9■□□□□ 0.94
SOX1O00570 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.9■□□□□ 0.94
SOX1O00570 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
SOX1O00570 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SOX1O00570 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.9■□□□□ 0.94
SOX1O00570 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.9■□□□□ 0.94
SOX1O00570 RNA5SP419-201ENST00000515908 135 ntBASIC20.9■□□□□ 0.94
SOX1O00570 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.9■□□□□ 0.94
SOX1O00570 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SOX1O00570 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SOX1O00570 AL691403.2-201ENST00000618460 490 ntBASIC20.9■□□□□ 0.94
SOX1O00570 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SOX1O00570 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SOX1O00570 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SOX1O00570 TFP1-202ENST00000475455 1573 ntBASIC20.89■□□□□ 0.94
SOX1O00570 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SOX1O00570 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
SOX1O00570 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SOX1O00570 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SOX1O00570 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SOX1O00570 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SOX1O00570 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms