Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TNFRSF11BO00300 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TNFRSF11BO00300 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNFRSF11BO00300 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TNFRSF11BO00300 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.11■□□□□ 0.49
TNFRSF11BO00300 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNFRSF11BO00300 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
TNFRSF11BO00300 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNFRSF11BO00300 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNFRSF11BO00300 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNFRSF11BO00300 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TNFRSF11BO00300 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNFRSF11BO00300 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TNFRSF11BO00300 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TNFRSF11BO00300 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
TNFRSF11BO00300 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
TNFRSF11BO00300 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.1■□□□□ 0.49
TNFRSF11BO00300 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNFRSF11BO00300 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.1■□□□□ 0.49
TNFRSF11BO00300 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.1■□□□□ 0.49
TNFRSF11BO00300 AC105020.6-201ENST00000621523 1217 ntBASIC18.1■□□□□ 0.49
TNFRSF11BO00300 AC013268.1-206ENST00000638368 961 ntBASIC18.1■□□□□ 0.49
TNFRSF11BO00300 AC112229.1-201ENST00000639295 961 ntBASIC18.1■□□□□ 0.49
TNFRSF11BO00300 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
TNFRSF11BO00300 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNFRSF11BO00300 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNFRSF11BO00300 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.1■□□□□ 0.49
TNFRSF11BO00300 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
TNFRSF11BO00300 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TNFRSF11BO00300 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TNFRSF11BO00300 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.09■□□□□ 0.49
TNFRSF11BO00300 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TNFRSF11BO00300 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TNFRSF11BO00300 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TNFRSF11BO00300 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TNFRSF11BO00300 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TNFRSF11BO00300 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.09■□□□□ 0.49
TNFRSF11BO00300 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.09■□□□□ 0.49
TNFRSF11BO00300 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.09■□□□□ 0.49
TNFRSF11BO00300 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TNFRSF11BO00300 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TNFRSF11BO00300 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TNFRSF11BO00300 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TNFRSF11BO00300 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
TNFRSF11BO00300 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TNFRSF11BO00300 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TNFRSF11BO00300 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.08■□□□□ 0.49
TNFRSF11BO00300 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.08■□□□□ 0.49
TNFRSF11BO00300 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TNFRSF11BO00300 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.49
TNFRSF11BO00300 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TNFRSF11BO00300 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
TNFRSF11BO00300 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
TNFRSF11BO00300 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TNFRSF11BO00300 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TNFRSF11BO00300 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
TNFRSF11BO00300 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
TNFRSF11BO00300 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
TNFRSF11BO00300 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.08■□□□□ 0.49
TNFRSF11BO00300 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.08■□□□□ 0.49
TNFRSF11BO00300 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.08■□□□□ 0.48
TNFRSF11BO00300 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TNFRSF11BO00300 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TNFRSF11BO00300 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.08■□□□□ 0.48
TNFRSF11BO00300 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.08■□□□□ 0.48
TNFRSF11BO00300 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.08■□□□□ 0.48
TNFRSF11BO00300 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
TNFRSF11BO00300 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TNFRSF11BO00300 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TNFRSF11BO00300 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TNFRSF11BO00300 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TNFRSF11BO00300 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TNFRSF11BO00300 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNFRSF11BO00300 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNFRSF11BO00300 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.07■□□□□ 0.48
TNFRSF11BO00300 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TNFRSF11BO00300 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TNFRSF11BO00300 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNFRSF11BO00300 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNFRSF11BO00300 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNFRSF11BO00300 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.07■□□□□ 0.48
TNFRSF11BO00300 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TNFRSF11BO00300 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TNFRSF11BO00300 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNFRSF11BO00300 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNFRSF11BO00300 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNFRSF11BO00300 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TNFRSF11BO00300 KRT18P68-201ENST00000392293 1000 ntBASIC18.07■□□□□ 0.48
TNFRSF11BO00300 RARRES2P4-201ENST00000514074 484 ntBASIC18.07■□□□□ 0.48
TNFRSF11BO00300 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.07■□□□□ 0.48
TNFRSF11BO00300 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.07■□□□□ 0.48
TNFRSF11BO00300 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TNFRSF11BO00300 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNFRSF11BO00300 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNFRSF11BO00300 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
TNFRSF11BO00300 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TNFRSF11BO00300 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TNFRSF11BO00300 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TNFRSF11BO00300 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TNFRSF11BO00300 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms