Protein–RNA interactions for Protein: O00221

NFKBIE, NF-kappa-B inhibitor epsilon, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIEO00221 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NFKBIEO00221 TMEM179-206ENST00000616017 1645 ntBASIC23.8■■□□□ 1.4
NFKBIEO00221 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NFKBIEO00221 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC23.8■■□□□ 1.4
NFKBIEO00221 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NFKBIEO00221 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NFKBIEO00221 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NFKBIEO00221 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.79■■□□□ 1.4
NFKBIEO00221 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NFKBIEO00221 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC23.79■■□□□ 1.4
NFKBIEO00221 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NFKBIEO00221 PRELID1P1-202ENST00000567272 903 ntBASIC23.79■■□□□ 1.4
NFKBIEO00221 MIR3652-201ENST00000579335 131 ntBASIC23.79■■□□□ 1.4
NFKBIEO00221 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC23.79■■□□□ 1.4
NFKBIEO00221 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NFKBIEO00221 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC23.79■■□□□ 1.4
NFKBIEO00221 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC23.79■■□□□ 1.4
NFKBIEO00221 PLK5-205ENST00000642079 1969 ntBASIC23.79■■□□□ 1.4
NFKBIEO00221 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
NFKBIEO00221 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC23.79■■□□□ 1.4
NFKBIEO00221 AC233723.2-201ENST00000623798 2106 ntBASIC23.78■■□□□ 1.4
NFKBIEO00221 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NFKBIEO00221 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NFKBIEO00221 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NFKBIEO00221 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NFKBIEO00221 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC23.78■■□□□ 1.4
NFKBIEO00221 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC23.78■■□□□ 1.4
NFKBIEO00221 AP000523.1-201ENST00000398242 1049 ntBASIC23.78■■□□□ 1.4
NFKBIEO00221 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC23.78■■□□□ 1.4
NFKBIEO00221 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC23.78■■□□□ 1.4
NFKBIEO00221 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NFKBIEO00221 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC23.78■■□□□ 1.4
NFKBIEO00221 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
NFKBIEO00221 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.78■■□□□ 1.4
NFKBIEO00221 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NFKBIEO00221 ECEL1P1-201ENST00000373592 1742 ntBASIC23.78■■□□□ 1.4
NFKBIEO00221 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC23.78■■□□□ 1.4
NFKBIEO00221 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
NFKBIEO00221 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC23.78■■□□□ 1.4
NFKBIEO00221 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
NFKBIEO00221 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NFKBIEO00221 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NFKBIEO00221 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC23.77■■□□□ 1.4
NFKBIEO00221 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
NFKBIEO00221 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC23.77■■□□□ 1.4
NFKBIEO00221 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC23.77■■□□□ 1.4
NFKBIEO00221 GPALPP1-207ENST00000611650 899 ntBASIC23.77■■□□□ 1.4
NFKBIEO00221 AC023511.2-201ENST00000618803 211 ntBASIC23.77■■□□□ 1.4
NFKBIEO00221 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NFKBIEO00221 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NFKBIEO00221 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NFKBIEO00221 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NFKBIEO00221 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NFKBIEO00221 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC23.77■■□□□ 1.4
NFKBIEO00221 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
NFKBIEO00221 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NFKBIEO00221 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC23.76■■□□□ 1.39
NFKBIEO00221 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC23.76■■□□□ 1.39
NFKBIEO00221 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NFKBIEO00221 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
NFKBIEO00221 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NFKBIEO00221 AC004870.1-201ENST00000315132 882 ntBASIC23.76■■□□□ 1.39
NFKBIEO00221 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NFKBIEO00221 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC23.76■■□□□ 1.39
NFKBIEO00221 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NFKBIEO00221 AC111152.3-201ENST00000569699 673 ntBASIC23.76■■□□□ 1.39
NFKBIEO00221 NEK4P2-201ENST00000580004 1012 ntBASIC23.76■■□□□ 1.39
NFKBIEO00221 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC23.76■■□□□ 1.39
NFKBIEO00221 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC23.76■■□□□ 1.39
NFKBIEO00221 AC006538.3-201ENST00000612495 578 ntBASIC23.76■■□□□ 1.39
NFKBIEO00221 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NFKBIEO00221 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
NFKBIEO00221 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NFKBIEO00221 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NFKBIEO00221 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NFKBIEO00221 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
NFKBIEO00221 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NFKBIEO00221 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
NFKBIEO00221 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC23.75■■□□□ 1.39
NFKBIEO00221 AL160286.2-201ENST00000567150 934 ntBASIC23.75■■□□□ 1.39
NFKBIEO00221 FGF14-AS2-201ENST00000606448 1074 ntBASIC23.75■■□□□ 1.39
NFKBIEO00221 AC004263.2-201ENST00000617183 678 ntBASIC23.75■■□□□ 1.39
NFKBIEO00221 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NFKBIEO00221 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NFKBIEO00221 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
NFKBIEO00221 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
NFKBIEO00221 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
NFKBIEO00221 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NFKBIEO00221 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NFKBIEO00221 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NFKBIEO00221 KRT8P8-201ENST00000434750 1448 ntBASIC23.75■■□□□ 1.39
NFKBIEO00221 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC23.75■■□□□ 1.39
NFKBIEO00221 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NFKBIEO00221 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NFKBIEO00221 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
NFKBIEO00221 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC23.74■■□□□ 1.39
NFKBIEO00221 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC23.74■■□□□ 1.39
NFKBIEO00221 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NFKBIEO00221 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NFKBIEO00221 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms