Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPIPA2E9PIF3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPIPA2E9PIF3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
NPIPA2E9PIF3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPIPA2E9PIF3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPIPA2E9PIF3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
NPIPA2E9PIF3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NPIPA2E9PIF3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.86■□□□□ 0.45
NPIPA2E9PIF3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NPIPA2E9PIF3 AL355355.2-201ENST00000442321 338 ntBASIC17.86■□□□□ 0.45
NPIPA2E9PIF3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NPIPA2E9PIF3 AL355075.4-201ENST00000554988 638 ntBASIC17.86■□□□□ 0.45
NPIPA2E9PIF3 CD177P1-201ENST00000606252 935 ntBASIC17.86■□□□□ 0.45
NPIPA2E9PIF3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.86■□□□□ 0.45
NPIPA2E9PIF3 AC026471.5-201ENST00000615068 467 ntBASIC17.86■□□□□ 0.45
NPIPA2E9PIF3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
NPIPA2E9PIF3 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.86■□□□□ 0.45
NPIPA2E9PIF3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
NPIPA2E9PIF3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NPIPA2E9PIF3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPIPA2E9PIF3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPIPA2E9PIF3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
NPIPA2E9PIF3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NPIPA2E9PIF3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NPIPA2E9PIF3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NPIPA2E9PIF3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
NPIPA2E9PIF3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
NPIPA2E9PIF3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NPIPA2E9PIF3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
NPIPA2E9PIF3 FAM197Y1-201ENST00000421178 764 ntBASIC17.85■□□□□ 0.45
NPIPA2E9PIF3 KRT16P6-202ENST00000425692 1426 ntBASIC17.85■□□□□ 0.45
NPIPA2E9PIF3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
NPIPA2E9PIF3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.85■□□□□ 0.45
NPIPA2E9PIF3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.85■□□□□ 0.45
NPIPA2E9PIF3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.85■□□□□ 0.45
NPIPA2E9PIF3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.85■□□□□ 0.45
NPIPA2E9PIF3 LINC01023-201ENST00000606054 436 ntBASIC17.85■□□□□ 0.45
NPIPA2E9PIF3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.85■□□□□ 0.45
NPIPA2E9PIF3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
NPIPA2E9PIF3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NPIPA2E9PIF3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NPIPA2E9PIF3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
NPIPA2E9PIF3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
NPIPA2E9PIF3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPIPA2E9PIF3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NPIPA2E9PIF3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.84■□□□□ 0.45
NPIPA2E9PIF3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPIPA2E9PIF3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.84■□□□□ 0.45
NPIPA2E9PIF3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.84■□□□□ 0.45
NPIPA2E9PIF3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPIPA2E9PIF3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPIPA2E9PIF3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
NPIPA2E9PIF3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
NPIPA2E9PIF3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.84■□□□□ 0.45
NPIPA2E9PIF3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NPIPA2E9PIF3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
NPIPA2E9PIF3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPIPA2E9PIF3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
NPIPA2E9PIF3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPIPA2E9PIF3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.84■□□□□ 0.45
NPIPA2E9PIF3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPIPA2E9PIF3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.84■□□□□ 0.45
NPIPA2E9PIF3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.84■□□□□ 0.45
NPIPA2E9PIF3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.84■□□□□ 0.45
NPIPA2E9PIF3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.84■□□□□ 0.45
NPIPA2E9PIF3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPIPA2E9PIF3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
NPIPA2E9PIF3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPIPA2E9PIF3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPIPA2E9PIF3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPIPA2E9PIF3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
NPIPA2E9PIF3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NPIPA2E9PIF3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPIPA2E9PIF3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NPIPA2E9PIF3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.83■□□□□ 0.45
NPIPA2E9PIF3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
NPIPA2E9PIF3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NPIPA2E9PIF3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
NPIPA2E9PIF3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NPIPA2E9PIF3 AL391422.3-201ENST00000603791 2761 ntBASIC17.83■□□□□ 0.45
NPIPA2E9PIF3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.83■□□□□ 0.45
NPIPA2E9PIF3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
NPIPA2E9PIF3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.83■□□□□ 0.44
NPIPA2E9PIF3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NPIPA2E9PIF3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.83■□□□□ 0.44
NPIPA2E9PIF3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.83■□□□□ 0.44
NPIPA2E9PIF3 AP002982.1-201ENST00000492365 877 ntBASIC17.83■□□□□ 0.44
NPIPA2E9PIF3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NPIPA2E9PIF3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.83■□□□□ 0.44
NPIPA2E9PIF3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.83■□□□□ 0.44
NPIPA2E9PIF3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.83■□□□□ 0.44
NPIPA2E9PIF3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NPIPA2E9PIF3 AP003071.4-201ENST00000562276 1284 ntBASIC17.83■□□□□ 0.44
NPIPA2E9PIF3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
NPIPA2E9PIF3 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.83■□□□□ 0.44
NPIPA2E9PIF3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.83■□□□□ 0.44
NPIPA2E9PIF3 AC133561.5-201ENST00000635547 218 ntBASIC17.83■□□□□ 0.44
NPIPA2E9PIF3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NPIPA2E9PIF3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.83■□□□□ 0.44
NPIPA2E9PIF3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms