Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
C4orf47A7E2U8 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
C4orf47A7E2U8 TUBB8P6-201ENST00000436895 1288 ntBASIC19.2■□□□□ 0.66
C4orf47A7E2U8 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
C4orf47A7E2U8 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.2■□□□□ 0.66
C4orf47A7E2U8 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.2■□□□□ 0.66
C4orf47A7E2U8 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
C4orf47A7E2U8 AC140113.3-201ENST00000605663 199 ntBASIC19.2■□□□□ 0.66
C4orf47A7E2U8 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
C4orf47A7E2U8 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
C4orf47A7E2U8 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
C4orf47A7E2U8 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
C4orf47A7E2U8 AC005332.1-201ENST00000577698 1310 ntBASIC19.2■□□□□ 0.66
C4orf47A7E2U8 AC244015.2-201ENST00000616358 1861 ntBASIC19.2■□□□□ 0.66
C4orf47A7E2U8 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
C4orf47A7E2U8 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
C4orf47A7E2U8 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C4orf47A7E2U8 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
C4orf47A7E2U8 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
C4orf47A7E2U8 KRT8P17-201ENST00000453110 1448 ntBASIC19.19■□□□□ 0.66
C4orf47A7E2U8 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.19■□□□□ 0.66
C4orf47A7E2U8 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C4orf47A7E2U8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
C4orf47A7E2U8 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C4orf47A7E2U8 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.19■□□□□ 0.66
C4orf47A7E2U8 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.19■□□□□ 0.66
C4orf47A7E2U8 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
C4orf47A7E2U8 AC004951.3-201ENST00000418645 1148 ntBASIC19.19■□□□□ 0.66
C4orf47A7E2U8 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.19■□□□□ 0.66
C4orf47A7E2U8 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
C4orf47A7E2U8 AC069148.1-201ENST00000608741 768 ntBASIC19.19■□□□□ 0.66
C4orf47A7E2U8 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.19■□□□□ 0.66
C4orf47A7E2U8 AC116407.4-201ENST00000623319 1061 ntBASIC19.19■□□□□ 0.66
C4orf47A7E2U8 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.19■□□□□ 0.66
C4orf47A7E2U8 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C4orf47A7E2U8 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C4orf47A7E2U8 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
C4orf47A7E2U8 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
C4orf47A7E2U8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
C4orf47A7E2U8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.19■□□□□ 0.66
C4orf47A7E2U8 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
C4orf47A7E2U8 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C4orf47A7E2U8 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
C4orf47A7E2U8 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
C4orf47A7E2U8 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C4orf47A7E2U8 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
C4orf47A7E2U8 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C4orf47A7E2U8 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.18■□□□□ 0.66
C4orf47A7E2U8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C4orf47A7E2U8 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
C4orf47A7E2U8 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C4orf47A7E2U8 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C4orf47A7E2U8 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.18■□□□□ 0.66
C4orf47A7E2U8 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.18■□□□□ 0.66
C4orf47A7E2U8 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
C4orf47A7E2U8 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
C4orf47A7E2U8 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
C4orf47A7E2U8 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C4orf47A7E2U8 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C4orf47A7E2U8 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C4orf47A7E2U8 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C4orf47A7E2U8 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C4orf47A7E2U8 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
C4orf47A7E2U8 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.18■□□□□ 0.66
C4orf47A7E2U8 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C4orf47A7E2U8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
C4orf47A7E2U8 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
C4orf47A7E2U8 AC096733.2-201ENST00000609937 1394 ntBASIC19.18■□□□□ 0.66
C4orf47A7E2U8 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
C4orf47A7E2U8 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.17■□□□□ 0.66
C4orf47A7E2U8 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C4orf47A7E2U8 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C4orf47A7E2U8 Z98882.1-201ENST00000622160 2253 ntBASIC19.17■□□□□ 0.66
C4orf47A7E2U8 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
C4orf47A7E2U8 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
C4orf47A7E2U8 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.17■□□□□ 0.66
C4orf47A7E2U8 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
C4orf47A7E2U8 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
C4orf47A7E2U8 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
C4orf47A7E2U8 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.17■□□□□ 0.66
C4orf47A7E2U8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.17■□□□□ 0.66
C4orf47A7E2U8 YBX1P10-201ENST00000444752 975 ntBASIC19.17■□□□□ 0.66
C4orf47A7E2U8 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.17■□□□□ 0.66
C4orf47A7E2U8 KRT18P16-201ENST00000510337 1294 ntBASIC19.17■□□□□ 0.66
C4orf47A7E2U8 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
C4orf47A7E2U8 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
C4orf47A7E2U8 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.17■□□□□ 0.66
C4orf47A7E2U8 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
C4orf47A7E2U8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C4orf47A7E2U8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.17■□□□□ 0.66
C4orf47A7E2U8 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.17■□□□□ 0.66
C4orf47A7E2U8 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
C4orf47A7E2U8 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C4orf47A7E2U8 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
C4orf47A7E2U8 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.17■□□□□ 0.66
C4orf47A7E2U8 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.17■□□□□ 0.66
C4orf47A7E2U8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C4orf47A7E2U8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.16■□□□□ 0.66
C4orf47A7E2U8 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C4orf47A7E2U8 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms