Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHISA3A0PJX4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHISA3A0PJX4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SHISA3A0PJX4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHISA3A0PJX4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHISA3A0PJX4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHISA3A0PJX4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHISA3A0PJX4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHISA3A0PJX4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.09■□□□□ 0.33
SHISA3A0PJX4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHISA3A0PJX4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHISA3A0PJX4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.09■□□□□ 0.33
SHISA3A0PJX4 AC110285.6-201ENST00000617652 491 ntBASIC17.09■□□□□ 0.33
SHISA3A0PJX4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHISA3A0PJX4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.09■□□□□ 0.33
SHISA3A0PJX4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.09■□□□□ 0.33
SHISA3A0PJX4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHISA3A0PJX4 PHGDH-210ENST00000641115 1638 ntBASIC17.09■□□□□ 0.33
SHISA3A0PJX4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHISA3A0PJX4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SHISA3A0PJX4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SHISA3A0PJX4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHISA3A0PJX4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHISA3A0PJX4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.09■□□□□ 0.33
SHISA3A0PJX4 NOC2LP1-202ENST00000452600 2235 ntBASIC17.09■□□□□ 0.33
SHISA3A0PJX4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHISA3A0PJX4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.09■□□□□ 0.33
SHISA3A0PJX4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHISA3A0PJX4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHISA3A0PJX4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
SHISA3A0PJX4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SHISA3A0PJX4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SHISA3A0PJX4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
SHISA3A0PJX4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SHISA3A0PJX4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SHISA3A0PJX4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
SHISA3A0PJX4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SHISA3A0PJX4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHISA3A0PJX4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHISA3A0PJX4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.08■□□□□ 0.32
SHISA3A0PJX4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.08■□□□□ 0.32
SHISA3A0PJX4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SHISA3A0PJX4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHISA3A0PJX4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHISA3A0PJX4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHISA3A0PJX4 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SHISA3A0PJX4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHISA3A0PJX4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SHISA3A0PJX4 AP000997.3-201ENST00000623333 2250 ntBASIC17.08■□□□□ 0.32
SHISA3A0PJX4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHISA3A0PJX4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.08■□□□□ 0.32
SHISA3A0PJX4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHISA3A0PJX4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.07■□□□□ 0.32
SHISA3A0PJX4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHISA3A0PJX4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHISA3A0PJX4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.07■□□□□ 0.32
SHISA3A0PJX4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHISA3A0PJX4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SHISA3A0PJX4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHISA3A0PJX4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SHISA3A0PJX4 AC068880.1-201ENST00000507289 2297 ntBASIC17.07■□□□□ 0.32
SHISA3A0PJX4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SHISA3A0PJX4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SHISA3A0PJX4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHISA3A0PJX4 AC027612.3-201ENST00000413684 1047 ntBASIC17.07■□□□□ 0.32
SHISA3A0PJX4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.07■□□□□ 0.32
SHISA3A0PJX4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.07■□□□□ 0.32
SHISA3A0PJX4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SHISA3A0PJX4 SUDS3P1-201ENST00000505831 966 ntBASIC17.07■□□□□ 0.32
SHISA3A0PJX4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.07■□□□□ 0.32
SHISA3A0PJX4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.07■□□□□ 0.32
SHISA3A0PJX4 AL139246.5-201ENST00000606645 996 ntBASIC17.07■□□□□ 0.32
SHISA3A0PJX4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SHISA3A0PJX4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.07■□□□□ 0.32
SHISA3A0PJX4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.07■□□□□ 0.32
SHISA3A0PJX4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHISA3A0PJX4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHISA3A0PJX4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.07■□□□□ 0.32
SHISA3A0PJX4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHISA3A0PJX4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHISA3A0PJX4 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHISA3A0PJX4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SHISA3A0PJX4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHISA3A0PJX4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHISA3A0PJX4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHISA3A0PJX4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHISA3A0PJX4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHISA3A0PJX4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.07■□□□□ 0.32
SHISA3A0PJX4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 NOC2LP2-201ENST00000407594 1944 ntBASIC17.06■□□□□ 0.32
SHISA3A0PJX4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SHISA3A0PJX4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms