Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-1A0A0A6YYK1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-1A0A0A6YYK1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-1A0A0A6YYK1 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-1A0A0A6YYK1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-1A0A0A6YYK1 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-1A0A0A6YYK1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-1A0A0A6YYK1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-1A0A0A6YYK1 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-1A0A0A6YYK1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV8-1A0A0A6YYK1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC14.88□□□□□ -0.03
TRAV8-1A0A0A6YYK1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC14.88□□□□□ -0.03
TRAV8-1A0A0A6YYK1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-1A0A0A6YYK1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TRAV8-1A0A0A6YYK1 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-1A0A0A6YYK1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRAV8-1A0A0A6YYK1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-1A0A0A6YYK1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-1A0A0A6YYK1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRAV8-1A0A0A6YYK1 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-1A0A0A6YYK1 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-1A0A0A6YYK1 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-1A0A0A6YYK1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-1A0A0A6YYK1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV8-1A0A0A6YYK1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-1A0A0A6YYK1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
TRAV8-1A0A0A6YYK1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAV8-1A0A0A6YYK1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-1A0A0A6YYK1 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-1A0A0A6YYK1 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-1A0A0A6YYK1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV8-1A0A0A6YYK1 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TRAV8-1A0A0A6YYK1 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-1A0A0A6YYK1 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-1A0A0A6YYK1 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TRAV8-1A0A0A6YYK1 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAV8-1A0A0A6YYK1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-1A0A0A6YYK1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-1A0A0A6YYK1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-1A0A0A6YYK1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-1A0A0A6YYK1 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-1A0A0A6YYK1 YBX1P1-201ENST00000445822 960 ntBASIC14.87□□□□□ -0.03
TRAV8-1A0A0A6YYK1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC14.87□□□□□ -0.03
TRAV8-1A0A0A6YYK1 AL031963.3-201ENST00000606441 850 ntBASIC14.87□□□□□ -0.03
TRAV8-1A0A0A6YYK1 MYCNOS-205ENST00000641950 531 ntBASIC14.87□□□□□ -0.03
TRAV8-1A0A0A6YYK1 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TRAV8-1A0A0A6YYK1 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV8-1A0A0A6YYK1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAV8-1A0A0A6YYK1 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-1A0A0A6YYK1 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-1A0A0A6YYK1 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-1A0A0A6YYK1 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-1A0A0A6YYK1 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-1A0A0A6YYK1 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-1A0A0A6YYK1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-1A0A0A6YYK1 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV8-1A0A0A6YYK1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 KRT8P20-201ENST00000423953 1409 ntBASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 AL591742.1-201ENST00000604433 565 ntBASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 SP2-202ENST00000613139 908 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 AC090340.1-201ENST00000620778 4980 ntBASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV8-1A0A0A6YYK1 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV8-1A0A0A6YYK1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAV8-1A0A0A6YYK1 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAV8-1A0A0A6YYK1 AC104581.1-202ENST00000635932 2618 ntBASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms