Protein–RNA interactions for Protein: A0A087X179

TBC1D3E, TBC1 domain family member 3E, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3EA0A087X179 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.53■□□□□ 0.72
TBC1D3EA0A087X179 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TBC1D3EA0A087X179 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TBC1D3EA0A087X179 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.53■□□□□ 0.72
TBC1D3EA0A087X179 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TBC1D3EA0A087X179 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TBC1D3EA0A087X179 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TBC1D3EA0A087X179 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TBC1D3EA0A087X179 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TBC1D3EA0A087X179 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.53■□□□□ 0.72
TBC1D3EA0A087X179 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TBC1D3EA0A087X179 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TBC1D3EA0A087X179 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TBC1D3EA0A087X179 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TBC1D3EA0A087X179 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TBC1D3EA0A087X179 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TBC1D3EA0A087X179 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TBC1D3EA0A087X179 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TBC1D3EA0A087X179 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TBC1D3EA0A087X179 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.52■□□□□ 0.72
TBC1D3EA0A087X179 MESTP1-201ENST00000404287 994 ntBASIC19.52■□□□□ 0.72
TBC1D3EA0A087X179 TMPOP1-202ENST00000424642 1267 ntBASIC19.52■□□□□ 0.72
TBC1D3EA0A087X179 AC011506.1-201ENST00000474329 610 ntBASIC19.52■□□□□ 0.72
TBC1D3EA0A087X179 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.52■□□□□ 0.72
TBC1D3EA0A087X179 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.52■□□□□ 0.72
TBC1D3EA0A087X179 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
TBC1D3EA0A087X179 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.52■□□□□ 0.72
TBC1D3EA0A087X179 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TBC1D3EA0A087X179 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TBC1D3EA0A087X179 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
TBC1D3EA0A087X179 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.52■□□□□ 0.71
TBC1D3EA0A087X179 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TBC1D3EA0A087X179 KRT18P22-201ENST00000402024 1347 ntBASIC19.51■□□□□ 0.71
TBC1D3EA0A087X179 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TBC1D3EA0A087X179 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TBC1D3EA0A087X179 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TBC1D3EA0A087X179 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TBC1D3EA0A087X179 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TBC1D3EA0A087X179 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TBC1D3EA0A087X179 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.51■□□□□ 0.71
TBC1D3EA0A087X179 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TBC1D3EA0A087X179 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.51■□□□□ 0.71
TBC1D3EA0A087X179 AP001271.2-201ENST00000624018 1556 ntBASIC19.51■□□□□ 0.71
TBC1D3EA0A087X179 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TBC1D3EA0A087X179 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.51■□□□□ 0.71
TBC1D3EA0A087X179 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TBC1D3EA0A087X179 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TBC1D3EA0A087X179 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TBC1D3EA0A087X179 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.5■□□□□ 0.71
TBC1D3EA0A087X179 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TBC1D3EA0A087X179 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TBC1D3EA0A087X179 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.5■□□□□ 0.71
TBC1D3EA0A087X179 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.5■□□□□ 0.71
TBC1D3EA0A087X179 RN7SL850P-201ENST00000579959 291 ntBASIC19.5■□□□□ 0.71
TBC1D3EA0A087X179 AC010947.1-201ENST00000623454 693 ntBASIC19.5■□□□□ 0.71
TBC1D3EA0A087X179 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TBC1D3EA0A087X179 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TBC1D3EA0A087X179 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TBC1D3EA0A087X179 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TBC1D3EA0A087X179 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TBC1D3EA0A087X179 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.5■□□□□ 0.71
TBC1D3EA0A087X179 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TBC1D3EA0A087X179 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TBC1D3EA0A087X179 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TBC1D3EA0A087X179 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TBC1D3EA0A087X179 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TBC1D3EA0A087X179 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TBC1D3EA0A087X179 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TBC1D3EA0A087X179 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.49■□□□□ 0.71
TBC1D3EA0A087X179 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TBC1D3EA0A087X179 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TBC1D3EA0A087X179 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TBC1D3EA0A087X179 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
TBC1D3EA0A087X179 CRYGFP-201ENST00000418459 633 ntBASIC19.49■□□□□ 0.71
TBC1D3EA0A087X179 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.49■□□□□ 0.71
TBC1D3EA0A087X179 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
TBC1D3EA0A087X179 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TBC1D3EA0A087X179 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.49■□□□□ 0.71
TBC1D3EA0A087X179 AC097488.1-201ENST00000507834 756 ntBASIC19.49■□□□□ 0.71
TBC1D3EA0A087X179 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.49■□□□□ 0.71
TBC1D3EA0A087X179 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.49■□□□□ 0.71
TBC1D3EA0A087X179 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TBC1D3EA0A087X179 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TBC1D3EA0A087X179 HLA-A-209ENST00000638375 975 ntBASIC19.49■□□□□ 0.71
TBC1D3EA0A087X179 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.49■□□□□ 0.71
TBC1D3EA0A087X179 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TBC1D3EA0A087X179 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.49■□□□□ 0.71
TBC1D3EA0A087X179 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
TBC1D3EA0A087X179 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TBC1D3EA0A087X179 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TBC1D3EA0A087X179 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TBC1D3EA0A087X179 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TBC1D3EA0A087X179 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
TBC1D3EA0A087X179 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TBC1D3EA0A087X179 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TBC1D3EA0A087X179 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
TBC1D3EA0A087X179 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.48■□□□□ 0.71
TBC1D3EA0A087X179 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TBC1D3EA0A087X179 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.48■□□□□ 0.71
TBC1D3EA0A087X179 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms