Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.85■□□□□ 0.29
TRAV18A0A075B6X5 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TRAV18A0A075B6X5 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV18A0A075B6X5 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TRAV18A0A075B6X5 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TRAV18A0A075B6X5 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV18A0A075B6X5 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
TRAV18A0A075B6X5 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV18A0A075B6X5 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV18A0A075B6X5 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV18A0A075B6X5 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.85■□□□□ 0.29
TRAV18A0A075B6X5 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV18A0A075B6X5 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TRAV18A0A075B6X5 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.85■□□□□ 0.29
TRAV18A0A075B6X5 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV18A0A075B6X5 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV18A0A075B6X5 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV18A0A075B6X5 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV18A0A075B6X5 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV18A0A075B6X5 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV18A0A075B6X5 PTBP1P-201ENST00000554374 1601 ntBASIC16.85■□□□□ 0.29
TRAV18A0A075B6X5 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV18A0A075B6X5 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV18A0A075B6X5 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
TRAV18A0A075B6X5 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV18A0A075B6X5 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV18A0A075B6X5 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV18A0A075B6X5 CROCCP3-202ENST00000420820 1947 ntBASIC16.84■□□□□ 0.29
TRAV18A0A075B6X5 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRAV18A0A075B6X5 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV18A0A075B6X5 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV18A0A075B6X5 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
TRAV18A0A075B6X5 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
TRAV18A0A075B6X5 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV18A0A075B6X5 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV18A0A075B6X5 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV18A0A075B6X5 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV18A0A075B6X5 SLC7A5P1-201ENST00000568957 537 ntBASIC16.84■□□□□ 0.29
TRAV18A0A075B6X5 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV18A0A075B6X5 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV18A0A075B6X5 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV18A0A075B6X5 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV18A0A075B6X5 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV18A0A075B6X5 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV18A0A075B6X5 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV18A0A075B6X5 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV18A0A075B6X5 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
TRAV18A0A075B6X5 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.84■□□□□ 0.29
TRAV18A0A075B6X5 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV18A0A075B6X5 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TRAV18A0A075B6X5 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRAV18A0A075B6X5 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.84■□□□□ 0.29
TRAV18A0A075B6X5 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.83■□□□□ 0.29
TRAV18A0A075B6X5 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRAV18A0A075B6X5 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV18A0A075B6X5 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV18A0A075B6X5 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TRAV18A0A075B6X5 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TRAV18A0A075B6X5 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
TRAV18A0A075B6X5 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV18A0A075B6X5 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.83■□□□□ 0.28
TRAV18A0A075B6X5 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV18A0A075B6X5 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAV18A0A075B6X5 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAV18A0A075B6X5 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.83■□□□□ 0.28
TRAV18A0A075B6X5 AL031432.3-201ENST00000607698 485 ntBASIC16.83■□□□□ 0.28
TRAV18A0A075B6X5 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAV18A0A075B6X5 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV18A0A075B6X5 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV18A0A075B6X5 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TRAV18A0A075B6X5 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV18A0A075B6X5 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TRAV18A0A075B6X5 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV18A0A075B6X5 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV18A0A075B6X5 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TRAV18A0A075B6X5 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV18A0A075B6X5 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
TRAV18A0A075B6X5 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV18A0A075B6X5 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV18A0A075B6X5 AC008406.3-201ENST00000620001 1374 ntBASIC16.82■□□□□ 0.28
TRAV18A0A075B6X5 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV18A0A075B6X5 AC019069.1-201ENST00000610008 1333 ntBASIC16.82■□□□□ 0.28
TRAV18A0A075B6X5 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV18A0A075B6X5 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV18A0A075B6X5 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.82■□□□□ 0.28
TRAV18A0A075B6X5 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV18A0A075B6X5 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV18A0A075B6X5 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV18A0A075B6X5 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV18A0A075B6X5 AL049812.1-201ENST00000432563 2267 ntBASIC16.82■□□□□ 0.28
TRAV18A0A075B6X5 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV18A0A075B6X5 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV18A0A075B6X5 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAV18A0A075B6X5 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV18A0A075B6X5 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV18A0A075B6X5 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
TRAV18A0A075B6X5 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV18A0A075B6X5 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV18A0A075B6X5 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.82■□□□□ 0.28
TRAV18A0A075B6X5 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms