Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 NRBF2P1-201ENST00000587407 859 ntBASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 AC005498.1-201ENST00000592125 465 ntBASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 AC055876.5-201ENST00000605667 259 ntBASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 AC112487.2-201ENST00000637950 304 ntBASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 AC018688.1-201ENST00000636528 1754 ntBASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 AC079097.1-201ENST00000512187 1399 ntBASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 IGKV7-3-201ENST00000357453 298 ntBASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 Y_RNA.142-201ENST00000363491 102 ntBASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 RNU6-483P-201ENST00000384088 108 ntBASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 RNU6-1103P-201ENST00000384150 107 ntBASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 MIR614-201ENST00000385082 90 ntBASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 PIGFP2-201ENST00000421400 651 ntBASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 CHCHD3P1-201ENST00000425516 676 ntBASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 PYHIN5P-201ENST00000431627 723 ntBASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 AC002504.1-201ENST00000438281 691 ntBASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 MTND6P13-201ENST00000443510 523 ntBASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 SS18L2P1-201ENST00000445923 213 ntBASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 SNRPGP6-201ENST00000451124 220 ntBASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 SULT1D1P-201ENST00000458020 882 ntBASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 CDKN2AIPNLP1-201ENST00000460287 302 ntBASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 GLRXP3-201ENST00000470810 321 ntBASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 AC098583.1-201ENST00000480875 255 ntBASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 POU5F1P7-201ENST00000508759 541 ntBASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 RPL37-205ENST00000509877 637 ntTSL 5 BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 AC233724.10-201ENST00000510454 409 ntBASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 AC099687.1-201ENST00000531798 510 ntTSL 3 BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 DAZAP2-210ENST00000551313 587 ntTSL 3 BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 CR382285.1-202ENST00000604687 547 ntBASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 BNIP3P10-201ENST00000605360 577 ntBASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 AC018695.5-201ENST00000605872 315 ntBASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 FAM74A6-203ENST00000615956 481 ntBASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 USP12-203ENST00000620323 349 ntTSL 3 BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 AC145207.9-201ENST00000623802 325 ntBASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 AC026634.1-201ENST00000634369 198 ntBASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 CASC19-212ENST00000641153 1287 ntBASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 NCOA4P3-201ENST00000513203 1877 ntBASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms