Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.66□□□□□ -1.5
NKX6-1P78426 AC078883.4-201ENST00000623218 367 ntBASIC5.66□□□□□ -1.5
NKX6-1P78426 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.66□□□□□ -1.5
NKX6-1P78426 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.66□□□□□ -1.5
NKX6-1P78426 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.66□□□□□ -1.5
NKX6-1P78426 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
NKX6-1P78426 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NKX6-1P78426 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NKX6-1P78426 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
NKX6-1P78426 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NKX6-1P78426 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NKX6-1P78426 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NKX6-1P78426 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.66□□□□□ -1.5
NKX6-1P78426 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NKX6-1P78426 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
NKX6-1P78426 MTCO1P6-201ENST00000481192 1384 ntBASIC5.66□□□□□ -1.5
NKX6-1P78426 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
NKX6-1P78426 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NKX6-1P78426 AL136531.3-201ENST00000624378 3658 ntBASIC5.66□□□□□ -1.5
NKX6-1P78426 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NKX6-1P78426 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
NKX6-1P78426 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.65□□□□□ -1.5
NKX6-1P78426 AC018628.1-201ENST00000624147 3819 ntBASIC5.65□□□□□ -1.5
NKX6-1P78426 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
NKX6-1P78426 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NKX6-1P78426 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NKX6-1P78426 RPL11P4-201ENST00000332269 436 ntBASIC5.65□□□□□ -1.5
NKX6-1P78426 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
NKX6-1P78426 LCN1P2-201ENST00000372030 223 ntBASIC5.65□□□□□ -1.5
NKX6-1P78426 RNU6-98P-201ENST00000384173 107 ntBASIC5.65□□□□□ -1.5
NKX6-1P78426 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NKX6-1P78426 AC004386.1-201ENST00000393214 761 ntBASIC5.65□□□□□ -1.5
NKX6-1P78426 RNA5SP198-201ENST00000410376 127 ntBASIC5.65□□□□□ -1.5
NKX6-1P78426 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.65□□□□□ -1.5
NKX6-1P78426 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NKX6-1P78426 RAC1P8-201ENST00000427086 527 ntBASIC5.65□□□□□ -1.5
NKX6-1P78426 CDY14P-201ENST00000431260 1014 ntBASIC5.65□□□□□ -1.5
NKX6-1P78426 CDY12P-201ENST00000440679 1015 ntBASIC5.65□□□□□ -1.5
NKX6-1P78426 CDY13P-201ENST00000445813 1015 ntBASIC5.65□□□□□ -1.5
NKX6-1P78426 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.65□□□□□ -1.5
NKX6-1P78426 Z83846.1-201ENST00000446798 265 ntBASIC5.65□□□□□ -1.5
NKX6-1P78426 CDY23P-201ENST00000451661 1014 ntBASIC5.65□□□□□ -1.5
NKX6-1P78426 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.65□□□□□ -1.5
NKX6-1P78426 SETP20-201ENST00000457046 852 ntBASIC5.65□□□□□ -1.5
NKX6-1P78426 AC009963.3-201ENST00000458090 486 ntBASIC5.65□□□□□ -1.5
NKX6-1P78426 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.65□□□□□ -1.5
NKX6-1P78426 AP000563.1-201ENST00000490865 758 ntBASIC5.65□□□□□ -1.5
NKX6-1P78426 RPL19P11-201ENST00000495944 589 ntBASIC5.65□□□□□ -1.5
NKX6-1P78426 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.65□□□□□ -1.5
NKX6-1P78426 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.65□□□□□ -1.5
NKX6-1P78426 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NKX6-1P78426 AC113347.3-201ENST00000509113 148 ntBASIC5.65□□□□□ -1.5
NKX6-1P78426 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.65□□□□□ -1.5
NKX6-1P78426 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.65□□□□□ -1.5
NKX6-1P78426 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.65□□□□□ -1.5
NKX6-1P78426 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.65□□□□□ -1.5
NKX6-1P78426 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NKX6-1P78426 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.65□□□□□ -1.5
NKX6-1P78426 KCTD9P4-201ENST00000526766 1166 ntBASIC5.65□□□□□ -1.5
NKX6-1P78426 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.65□□□□□ -1.5
NKX6-1P78426 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.65□□□□□ -1.5
NKX6-1P78426 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.65□□□□□ -1.5
NKX6-1P78426 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.65□□□□□ -1.5
NKX6-1P78426 AC090115.2-201ENST00000548060 883 ntBASIC5.65□□□□□ -1.5
NKX6-1P78426 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC5.65□□□□□ -1.5
NKX6-1P78426 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.65□□□□□ -1.5
NKX6-1P78426 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.65□□□□□ -1.5
NKX6-1P78426 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.65□□□□□ -1.5
NKX6-1P78426 AC069366.1-201ENST00000583159 838 ntBASIC5.65□□□□□ -1.5
NKX6-1P78426 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.65□□□□□ -1.5
NKX6-1P78426 EIF1P6-201ENST00000600054 334 ntBASIC5.65□□□□□ -1.5
NKX6-1P78426 AC091057.2-201ENST00000602594 792 ntBASIC5.65□□□□□ -1.5
NKX6-1P78426 AC067773.1-201ENST00000603284 1094 ntBASIC5.65□□□□□ -1.5
NKX6-1P78426 AL157899.1-201ENST00000604110 936 ntBASIC5.65□□□□□ -1.5
NKX6-1P78426 AC024257.5-201ENST00000612739 531 ntBASIC5.65□□□□□ -1.5
NKX6-1P78426 AL138960.1-201ENST00000613838 513 ntBASIC5.65□□□□□ -1.5
NKX6-1P78426 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.65□□□□□ -1.5
NKX6-1P78426 AC139769.3-201ENST00000618383 175 ntBASIC5.65□□□□□ -1.5
NKX6-1P78426 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NKX6-1P78426 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NKX6-1P78426 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.65□□□□□ -1.51
NKX6-1P78426 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
NKX6-1P78426 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.65□□□□□ -1.51
NKX6-1P78426 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC5.65□□□□□ -1.51
NKX6-1P78426 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
NKX6-1P78426 AC005261.4-201ENST00000600047 1385 ntBASIC5.65□□□□□ -1.51
NKX6-1P78426 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC5.65□□□□□ -1.51
NKX6-1P78426 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
NKX6-1P78426 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
NKX6-1P78426 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.65□□□□□ -1.51
NKX6-1P78426 AC005702.3-201ENST00000585345 1447 ntBASIC5.65□□□□□ -1.51
NKX6-1P78426 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.65□□□□□ -1.51
NKX6-1P78426 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
NKX6-1P78426 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
NKX6-1P78426 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
NKX6-1P78426 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.65□□□□□ -1.51
NKX6-1P78426 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NKX6-1P78426 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NKX6-1P78426 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
NKX6-1P78426 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms