Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SEC61A1P61619 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.07□□□□□ -1.6
SEC61A1P61619 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.07□□□□□ -1.6
SEC61A1P61619 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.07□□□□□ -1.6
SEC61A1P61619 AC090666.1-201ENST00000578241 445 ntBASIC5.07□□□□□ -1.6
SEC61A1P61619 AP005119.1-201ENST00000580956 292 ntBASIC5.07□□□□□ -1.6
SEC61A1P61619 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.07□□□□□ -1.6
SEC61A1P61619 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.07□□□□□ -1.6
SEC61A1P61619 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.07□□□□□ -1.6
SEC61A1P61619 AL645933.2-201ENST00000606743 1207 ntBASIC5.07□□□□□ -1.6
SEC61A1P61619 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SEC61A1P61619 AL096712.1-201ENST00000614561 159 ntBASIC5.07□□□□□ -1.6
SEC61A1P61619 AC009159.2-201ENST00000617603 606 ntBASIC5.07□□□□□ -1.6
SEC61A1P61619 AL136228.1-201ENST00000622221 319 ntBASIC5.07□□□□□ -1.6
SEC61A1P61619 SNX18P12-201ENST00000624821 759 ntBASIC5.07□□□□□ -1.6
SEC61A1P61619 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
SEC61A1P61619 AC003985.2-201ENST00000562268 1669 ntBASIC5.07□□□□□ -1.6
SEC61A1P61619 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SEC61A1P61619 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SEC61A1P61619 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SEC61A1P61619 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SEC61A1P61619 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
SEC61A1P61619 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SEC61A1P61619 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.07□□□□□ -1.6
SEC61A1P61619 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.06□□□□□ -1.6
SEC61A1P61619 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SEC61A1P61619 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SEC61A1P61619 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.06□□□□□ -1.6
SEC61A1P61619 SUGT1P2-201ENST00000379452 992 ntBASIC5.06□□□□□ -1.6
SEC61A1P61619 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.06□□□□□ -1.6
SEC61A1P61619 AL354890.1-201ENST00000413730 346 ntBASIC5.06□□□□□ -1.6
SEC61A1P61619 GTF2IP5-201ENST00000414608 731 ntBASIC5.06□□□□□ -1.6
SEC61A1P61619 RPS3P2-201ENST00000421346 701 ntBASIC5.06□□□□□ -1.6
SEC61A1P61619 AC092447.3-201ENST00000426027 686 ntBASIC5.06□□□□□ -1.6
SEC61A1P61619 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.06□□□□□ -1.6
SEC61A1P61619 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.06□□□□□ -1.6
SEC61A1P61619 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC5.06□□□□□ -1.6
SEC61A1P61619 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.06□□□□□ -1.6
SEC61A1P61619 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.06□□□□□ -1.6
SEC61A1P61619 BUD31P2-201ENST00000449374 300 ntBASIC5.06□□□□□ -1.6
SEC61A1P61619 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.06□□□□□ -1.6
SEC61A1P61619 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SEC61A1P61619 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.06□□□□□ -1.6
SEC61A1P61619 RN7SL423P-201ENST00000486202 304 ntBASIC5.06□□□□□ -1.6
SEC61A1P61619 RN7SL205P-201ENST00000490174 284 ntBASIC5.06□□□□□ -1.6
SEC61A1P61619 OR9N1P-202ENST00000494289 481 ntBASIC5.06□□□□□ -1.6
SEC61A1P61619 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.06□□□□□ -1.6
SEC61A1P61619 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.06□□□□□ -1.6
SEC61A1P61619 AC021146.5-201ENST00000503544 545 ntBASIC5.06□□□□□ -1.6
SEC61A1P61619 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.06□□□□□ -1.6
SEC61A1P61619 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.06□□□□□ -1.6
SEC61A1P61619 Y_RNA.667-201ENST00000516212 107 ntBASIC5.06□□□□□ -1.6
SEC61A1P61619 RN7SKP288-201ENST00000516227 268 ntBASIC5.06□□□□□ -1.6
SEC61A1P61619 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC5.06□□□□□ -1.6
SEC61A1P61619 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.06□□□□□ -1.6
SEC61A1P61619 MTND2P38-201ENST00000522536 667 ntBASIC5.06□□□□□ -1.6
SEC61A1P61619 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.06□□□□□ -1.6
SEC61A1P61619 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.06□□□□□ -1.6
SEC61A1P61619 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.06□□□□□ -1.6
SEC61A1P61619 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC5.06□□□□□ -1.6
SEC61A1P61619 NANOGNBP2-201ENST00000544753 553 ntBASIC5.06□□□□□ -1.6
SEC61A1P61619 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.06□□□□□ -1.6
SEC61A1P61619 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
SEC61A1P61619 AC007956.1-201ENST00000555623 542 ntBASIC5.06□□□□□ -1.6
SEC61A1P61619 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC5.06□□□□□ -1.6
SEC61A1P61619 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.06□□□□□ -1.6
SEC61A1P61619 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.06□□□□□ -1.6
SEC61A1P61619 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.06□□□□□ -1.6
SEC61A1P61619 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.06□□□□□ -1.6
SEC61A1P61619 AC004775.1-201ENST00000607389 753 ntBASIC5.06□□□□□ -1.6
SEC61A1P61619 AC108673.3-201ENST00000609183 335 ntBASIC5.06□□□□□ -1.6
SEC61A1P61619 AL592494.3-201ENST00000609485 464 ntBASIC5.06□□□□□ -1.6
SEC61A1P61619 AC097478.2-201ENST00000610572 514 ntBASIC5.06□□□□□ -1.6
SEC61A1P61619 AC004241.3-201ENST00000611728 517 ntBASIC5.06□□□□□ -1.6
SEC61A1P61619 MIR8084-201ENST00000614105 89 ntBASIC5.06□□□□□ -1.6
SEC61A1P61619 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SEC61A1P61619 AC015722.2-201ENST00000622210 551 ntBASIC5.06□□□□□ -1.6
SEC61A1P61619 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.06□□□□□ -1.6
SEC61A1P61619 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.06□□□□□ -1.6
SEC61A1P61619 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
SEC61A1P61619 AC091305.2-201ENST00000624049 1576 ntBASIC5.06□□□□□ -1.6
SEC61A1P61619 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
SEC61A1P61619 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.06□□□□□ -1.6
SEC61A1P61619 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SEC61A1P61619 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.06□□□□□ -1.6
SEC61A1P61619 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SEC61A1P61619 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
SEC61A1P61619 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.05□□□□□ -1.6
SEC61A1P61619 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SEC61A1P61619 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SEC61A1P61619 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.05□□□□□ -1.6
SEC61A1P61619 SEPT7P7-201ENST00000420492 1301 ntBASIC5.05□□□□□ -1.6
SEC61A1P61619 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.05□□□□□ -1.6
SEC61A1P61619 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
SEC61A1P61619 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
SEC61A1P61619 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.05□□□□□ -1.6
SEC61A1P61619 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SEC61A1P61619 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SEC61A1P61619 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.05□□□□□ -1.6
SEC61A1P61619 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms