Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.16□□□□□ -1.42
CIITAP33076 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.16□□□□□ -1.42
CIITAP33076 AC009963.4-201ENST00000448535 339 ntBASIC6.16□□□□□ -1.42
CIITAP33076 EIF4A2P2-201ENST00000455776 1070 ntBASIC6.16□□□□□ -1.42
CIITAP33076 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC6.16□□□□□ -1.42
CIITAP33076 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC6.16□□□□□ -1.42
CIITAP33076 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.16□□□□□ -1.42
CIITAP33076 RPEP1-201ENST00000504507 658 ntBASIC6.16□□□□□ -1.42
CIITAP33076 AC109464.1-201ENST00000511091 819 ntBASIC6.16□□□□□ -1.42
CIITAP33076 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.16□□□□□ -1.42
CIITAP33076 SCARNA16.4-201ENST00000516956 187 ntBASIC6.16□□□□□ -1.42
CIITAP33076 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC6.16□□□□□ -1.42
CIITAP33076 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.16□□□□□ -1.42
CIITAP33076 EIF4A2P3-201ENST00000525903 1055 ntBASIC6.16□□□□□ -1.42
CIITAP33076 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.16□□□□□ -1.42
CIITAP33076 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.16□□□□□ -1.42
CIITAP33076 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.16□□□□□ -1.42
CIITAP33076 AL136520.1-202ENST00000555494 763 ntBASIC6.16□□□□□ -1.42
CIITAP33076 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.16□□□□□ -1.42
CIITAP33076 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.16□□□□□ -1.42
CIITAP33076 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.16□□□□□ -1.42
CIITAP33076 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.16□□□□□ -1.42
CIITAP33076 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC6.16□□□□□ -1.42
CIITAP33076 MIR6837-201ENST00000620884 64 ntBASIC6.16□□□□□ -1.42
CIITAP33076 AC136428.4-201ENST00000634254 1155 ntBASIC6.16□□□□□ -1.42
CIITAP33076 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.16□□□□□ -1.42
CIITAP33076 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC6.16□□□□□ -1.42
CIITAP33076 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
CIITAP33076 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
CIITAP33076 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CIITAP33076 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.16□□□□□ -1.42
CIITAP33076 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.16□□□□□ -1.42
CIITAP33076 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CIITAP33076 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CIITAP33076 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.15□□□□□ -1.42
CIITAP33076 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CIITAP33076 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
CIITAP33076 AL355834.1-201ENST00000556602 3965 ntBASIC6.15□□□□□ -1.42
CIITAP33076 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CIITAP33076 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CIITAP33076 RNU1-77P-201ENST00000390868 162 ntBASIC6.15□□□□□ -1.42
CIITAP33076 AL133388.1-201ENST00000404509 287 ntBASIC6.15□□□□□ -1.42
CIITAP33076 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.15□□□□□ -1.42
CIITAP33076 RN7SKP59-201ENST00000410520 314 ntBASIC6.15□□□□□ -1.42
CIITAP33076 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.15□□□□□ -1.42
CIITAP33076 CR848007.2-201ENST00000424918 787 ntBASIC6.15□□□□□ -1.42
CIITAP33076 GSTM5P1-201ENST00000434751 660 ntBASIC6.15□□□□□ -1.42
CIITAP33076 SCAND3P1-201ENST00000439854 1060 ntBASIC6.15□□□□□ -1.42
CIITAP33076 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CIITAP33076 GAPDHP25-201ENST00000447061 1001 ntBASIC6.15□□□□□ -1.42
CIITAP33076 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.15□□□□□ -1.42
CIITAP33076 OR6C72P-201ENST00000451403 892 ntBASIC6.15□□□□□ -1.42
CIITAP33076 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.15□□□□□ -1.42
CIITAP33076 RN7SL447P-201ENST00000494711 245 ntBASIC6.15□□□□□ -1.42
CIITAP33076 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
CIITAP33076 CAB39P1-201ENST00000502277 460 ntBASIC6.15□□□□□ -1.42
CIITAP33076 AC024558.1-201ENST00000505008 528 ntBASIC6.15□□□□□ -1.42
CIITAP33076 PGAM1P13-201ENST00000507497 754 ntBASIC6.15□□□□□ -1.42
CIITAP33076 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.15□□□□□ -1.42
CIITAP33076 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.15□□□□□ -1.42
CIITAP33076 AC079064.1-201ENST00000528365 362 ntBASIC6.15□□□□□ -1.42
CIITAP33076 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
CIITAP33076 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.15□□□□□ -1.42
CIITAP33076 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.15□□□□□ -1.42
CIITAP33076 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.15□□□□□ -1.42
CIITAP33076 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.15□□□□□ -1.42
CIITAP33076 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.15□□□□□ -1.42
CIITAP33076 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.15□□□□□ -1.42
CIITAP33076 AP000769.2-201ENST00000602344 396 ntBASIC6.15□□□□□ -1.42
CIITAP33076 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CIITAP33076 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.15□□□□□ -1.42
CIITAP33076 AP000894.4-201ENST00000610185 483 ntBASIC6.15□□□□□ -1.42
CIITAP33076 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CIITAP33076 AC109583.2-201ENST00000617367 129 ntBASIC6.15□□□□□ -1.42
CIITAP33076 AC009032.1-201ENST00000617574 431 ntBASIC6.15□□□□□ -1.42
CIITAP33076 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.15□□□□□ -1.42
CIITAP33076 AC106858.1-201ENST00000637497 429 ntBASIC6.15□□□□□ -1.42
CIITAP33076 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
CIITAP33076 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CIITAP33076 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
CIITAP33076 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CIITAP33076 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.15□□□□□ -1.43
CIITAP33076 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CIITAP33076 AC079097.1-201ENST00000512187 1399 ntBASIC6.15□□□□□ -1.43
CIITAP33076 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.15□□□□□ -1.43
CIITAP33076 AC018628.1-201ENST00000624147 3819 ntBASIC6.15□□□□□ -1.43
CIITAP33076 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
CIITAP33076 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CIITAP33076 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CIITAP33076 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.14□□□□□ -1.43
CIITAP33076 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.14□□□□□ -1.43
CIITAP33076 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CIITAP33076 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CIITAP33076 AC104964.3-201ENST00000606115 2860 ntBASIC6.14□□□□□ -1.43
CIITAP33076 AC100757.1-201ENST00000616872 1835 ntBASIC6.14□□□□□ -1.43
CIITAP33076 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CIITAP33076 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.14□□□□□ -1.43
CIITAP33076 RNU11-201ENST00000387069 134 ntBASIC6.14□□□□□ -1.43
CIITAP33076 OR1F12-201ENST00000402365 945 ntBASIC6.14□□□□□ -1.43
CIITAP33076 RNU6-564P-201ENST00000410983 104 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms