Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
NFKB1P19838 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
NFKB1P19838 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
NFKB1P19838 RNU5F-7P-201ENST00000363696 115 ntBASIC7.12□□□□□ -1.27
NFKB1P19838 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NFKB1P19838 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NFKB1P19838 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NFKB1P19838 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NFKB1P19838 RPL17P12-201ENST00000413391 526 ntBASIC7.12□□□□□ -1.27
NFKB1P19838 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC7.12□□□□□ -1.27
NFKB1P19838 CHCHD3P1-201ENST00000425516 676 ntBASIC7.12□□□□□ -1.27
NFKB1P19838 DSTNP5-201ENST00000427921 523 ntBASIC7.12□□□□□ -1.27
NFKB1P19838 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC7.12□□□□□ -1.27
NFKB1P19838 AL365184.2-201ENST00000431139 435 ntBASIC7.12□□□□□ -1.27
NFKB1P19838 AL050321.1-201ENST00000432363 400 ntBASIC7.12□□□□□ -1.27
NFKB1P19838 KCTD9P3-201ENST00000434597 1169 ntBASIC7.12□□□□□ -1.27
NFKB1P19838 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.12□□□□□ -1.27
NFKB1P19838 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC7.12□□□□□ -1.27
NFKB1P19838 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC7.12□□□□□ -1.27
NFKB1P19838 MTND1P18-201ENST00000448191 573 ntBASIC7.12□□□□□ -1.27
NFKB1P19838 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC7.12□□□□□ -1.27
NFKB1P19838 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC7.12□□□□□ -1.27
NFKB1P19838 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC7.12□□□□□ -1.27
NFKB1P19838 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC7.12□□□□□ -1.27
NFKB1P19838 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC7.12□□□□□ -1.27
NFKB1P19838 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC7.12□□□□□ -1.27
NFKB1P19838 SNORD42A-201ENST00000459584 64 ntBASIC7.12□□□□□ -1.27
NFKB1P19838 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC7.12□□□□□ -1.27
NFKB1P19838 AC013828.1-201ENST00000481845 158 ntBASIC7.12□□□□□ -1.27
NFKB1P19838 GAPDHP39-201ENST00000481866 979 ntBASIC7.12□□□□□ -1.27
NFKB1P19838 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC7.12□□□□□ -1.27
NFKB1P19838 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC7.12□□□□□ -1.27
NFKB1P19838 RNU6-1225P-201ENST00000516336 65 ntBASIC7.12□□□□□ -1.27
NFKB1P19838 RN7SKP233-201ENST00000517005 110 ntBASIC7.12□□□□□ -1.27
NFKB1P19838 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC7.12□□□□□ -1.27
NFKB1P19838 EEF1B2P2-201ENST00000519625 676 ntBASIC7.12□□□□□ -1.27
NFKB1P19838 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC7.12□□□□□ -1.27
NFKB1P19838 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC7.12□□□□□ -1.27
NFKB1P19838 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC7.12□□□□□ -1.27
NFKB1P19838 OR4C2P-201ENST00000530855 1064 ntBASIC7.12□□□□□ -1.27
NFKB1P19838 NDUFA3P2-201ENST00000531434 232 ntBASIC7.12□□□□□ -1.27
NFKB1P19838 NPIPB14P-203ENST00000532298 987 ntBASIC7.12□□□□□ -1.27
NFKB1P19838 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC7.12□□□□□ -1.27
NFKB1P19838 AC009729.1-201ENST00000548873 1133 ntBASIC7.12□□□□□ -1.27
NFKB1P19838 NIFKP8-201ENST00000560500 874 ntBASIC7.12□□□□□ -1.27
NFKB1P19838 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC7.12□□□□□ -1.27
NFKB1P19838 IGLJCOR18-201ENST00000584002 424 ntBASIC7.12□□□□□ -1.27
NFKB1P19838 AC103792.1-201ENST00000603591 919 ntBASIC7.12□□□□□ -1.27
NFKB1P19838 AC111186.1-201ENST00000604684 130 ntBASIC7.12□□□□□ -1.27
NFKB1P19838 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC7.12□□□□□ -1.27
NFKB1P19838 AL161420.1-201ENST00000619393 264 ntBASIC7.12□□□□□ -1.27
NFKB1P19838 AC087894.3-201ENST00000623682 349 ntBASIC7.12□□□□□ -1.27
NFKB1P19838 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
NFKB1P19838 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NFKB1P19838 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
NFKB1P19838 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NFKB1P19838 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7.12□□□□□ -1.27
NFKB1P19838 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.12□□□□□ -1.27
NFKB1P19838 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NFKB1P19838 AC006026.1-201ENST00000444025 1803 ntBASIC7.12□□□□□ -1.27
NFKB1P19838 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NFKB1P19838 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC7.12□□□□□ -1.27
NFKB1P19838 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NFKB1P19838 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
NFKB1P19838 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NFKB1P19838 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NFKB1P19838 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
NFKB1P19838 AC090181.3-201ENST00000624777 1514 ntBASIC7.11□□□□□ -1.27
NFKB1P19838 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NFKB1P19838 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.11□□□□□ -1.27
NFKB1P19838 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC7.11□□□□□ -1.27
NFKB1P19838 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
NFKB1P19838 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
NFKB1P19838 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
NFKB1P19838 AL117339.4-201ENST00000608335 7063 ntBASIC7.11□□□□□ -1.27
NFKB1P19838 NCOA4P3-201ENST00000513203 1877 ntBASIC7.11□□□□□ -1.27
NFKB1P19838 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NFKB1P19838 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NFKB1P19838 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NFKB1P19838 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
NFKB1P19838 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NFKB1P19838 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC7.11□□□□□ -1.27
NFKB1P19838 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NFKB1P19838 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NFKB1P19838 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
NFKB1P19838 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC7.11□□□□□ -1.27
NFKB1P19838 RNU6-543P-201ENST00000362576 108 ntBASIC7.11□□□□□ -1.27
NFKB1P19838 Y_RNA.263-201ENST00000364659 114 ntBASIC7.11□□□□□ -1.27
NFKB1P19838 RN7SKP55-201ENST00000364888 307 ntBASIC7.11□□□□□ -1.27
NFKB1P19838 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
NFKB1P19838 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
NFKB1P19838 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
NFKB1P19838 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
NFKB1P19838 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
NFKB1P19838 RPS3AP23-201ENST00000401762 784 ntBASIC7.11□□□□□ -1.27
NFKB1P19838 RPL5P20-201ENST00000403848 896 ntBASIC7.11□□□□□ -1.27
NFKB1P19838 RNU4ATAC2P-201ENST00000408674 126 ntBASIC7.11□□□□□ -1.27
NFKB1P19838 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC7.11□□□□□ -1.27
NFKB1P19838 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC7.11□□□□□ -1.27
NFKB1P19838 AF228730.4-201ENST00000421457 183 ntBASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms