Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
CXCL1P09341 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CXCL1P09341 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CXCL1P09341 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CXCL1P09341 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.03□□□□□ -1.76
CXCL1P09341 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
CXCL1P09341 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CXCL1P09341 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.03□□□□□ -1.76
CXCL1P09341 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CXCL1P09341 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
CXCL1P09341 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CXCL1P09341 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CXCL1P09341 TINAG-203ENST00000370869 782 ntTSL 3 BASIC4.03□□□□□ -1.76
CXCL1P09341 MIR130B-202ENST00000385018 82 ntBASIC4.03□□□□□ -1.76
CXCL1P09341 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
CXCL1P09341 RPS3AP2-201ENST00000407190 754 ntBASIC4.03□□□□□ -1.76
CXCL1P09341 U3.32-201ENST00000408116 212 ntBASIC4.03□□□□□ -1.76
CXCL1P09341 OR2AT2P-201ENST00000413438 905 ntBASIC4.03□□□□□ -1.76
CXCL1P09341 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.03□□□□□ -1.76
CXCL1P09341 GTF2IP2-201ENST00000424290 697 ntBASIC4.03□□□□□ -1.76
CXCL1P09341 AC064862.5-201ENST00000440618 334 ntBASIC4.03□□□□□ -1.76
CXCL1P09341 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC4.03□□□□□ -1.76
CXCL1P09341 NOP56P2-201ENST00000447491 769 ntBASIC4.03□□□□□ -1.76
CXCL1P09341 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.03□□□□□ -1.76
CXCL1P09341 GAS5-218ENST00000448718 565 ntTSL 2 BASIC4.03□□□□□ -1.76
CXCL1P09341 AC020890.1-201ENST00000491837 504 ntBASIC4.03□□□□□ -1.76
CXCL1P09341 NENFP3-201ENST00000503735 313 ntBASIC4.03□□□□□ -1.76
CXCL1P09341 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.03□□□□□ -1.76
CXCL1P09341 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC4.03□□□□□ -1.76
CXCL1P09341 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC4.03□□□□□ -1.76
CXCL1P09341 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC4.03□□□□□ -1.76
CXCL1P09341 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.03□□□□□ -1.76
CXCL1P09341 AP000648.1-201ENST00000529682 397 ntBASIC4.03□□□□□ -1.76
CXCL1P09341 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CXCL1P09341 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CXCL1P09341 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.03□□□□□ -1.76
CXCL1P09341 AC125612.1-201ENST00000547580 377 ntBASIC4.03□□□□□ -1.76
CXCL1P09341 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.03□□□□□ -1.76
CXCL1P09341 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC4.03□□□□□ -1.76
CXCL1P09341 GLRXP2-201ENST00000555594 321 ntBASIC4.03□□□□□ -1.76
CXCL1P09341 AGGF1P9-201ENST00000561884 913 ntBASIC4.03□□□□□ -1.76
CXCL1P09341 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC4.03□□□□□ -1.76
CXCL1P09341 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.03□□□□□ -1.76
CXCL1P09341 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC4.03□□□□□ -1.76
CXCL1P09341 FAM27E4-201ENST00000605259 342 ntBASIC4.03□□□□□ -1.76
CXCL1P09341 AL031601.1-201ENST00000605702 394 ntBASIC4.03□□□□□ -1.76
CXCL1P09341 uc_338.31-201ENST00000615595 186 ntBASIC4.03□□□□□ -1.76
CXCL1P09341 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
CXCL1P09341 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CXCL1P09341 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CXCL1P09341 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
CXCL1P09341 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CXCL1P09341 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CXCL1P09341 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.03□□□□□ -1.76
CXCL1P09341 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
CXCL1P09341 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CXCL1P09341 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CXCL1P09341 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CXCL1P09341 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.03□□□□□ -1.77
CXCL1P09341 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
CXCL1P09341 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.03□□□□□ -1.77
CXCL1P09341 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CXCL1P09341 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.02□□□□□ -1.77
CXCL1P09341 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CXCL1P09341 AL354854.1-201ENST00000455940 1363 ntBASIC4.02□□□□□ -1.77
CXCL1P09341 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.02□□□□□ -1.77
CXCL1P09341 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.02□□□□□ -1.77
CXCL1P09341 SCARNA15-201ENST00000607520 4325 ntBASIC4.02□□□□□ -1.77
CXCL1P09341 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
CXCL1P09341 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.02□□□□□ -1.77
CXCL1P09341 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.02□□□□□ -1.77
CXCL1P09341 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CXCL1P09341 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CXCL1P09341 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CXCL1P09341 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.02□□□□□ -1.77
CXCL1P09341 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.02□□□□□ -1.77
CXCL1P09341 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CXCL1P09341 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CXCL1P09341 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CXCL1P09341 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CXCL1P09341 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC4.02□□□□□ -1.77
CXCL1P09341 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.02□□□□□ -1.77
CXCL1P09341 RNFT1P3-201ENST00000340898 1052 ntBASIC4.02□□□□□ -1.77
CXCL1P09341 BMS1P3-201ENST00000372011 932 ntBASIC4.02□□□□□ -1.77
CXCL1P09341 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.02□□□□□ -1.77
CXCL1P09341 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.02□□□□□ -1.77
CXCL1P09341 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CXCL1P09341 MIR551A-201ENST00000385042 96 ntBASIC4.02□□□□□ -1.77
CXCL1P09341 RNA5SP231-201ENST00000410496 138 ntBASIC4.02□□□□□ -1.77
CXCL1P09341 PRUNEP1-201ENST00000425846 705 ntBASIC4.02□□□□□ -1.77
CXCL1P09341 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CXCL1P09341 AC006335.2-201ENST00000437993 330 ntBASIC4.02□□□□□ -1.77
CXCL1P09341 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.02□□□□□ -1.77
CXCL1P09341 ARL4AP3-201ENST00000441452 574 ntBASIC4.02□□□□□ -1.77
CXCL1P09341 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CXCL1P09341 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.02□□□□□ -1.77
CXCL1P09341 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.02□□□□□ -1.77
CXCL1P09341 BX842559.2-201ENST00000451418 605 ntBASIC4.02□□□□□ -1.77
CXCL1P09341 PPIAP27-201ENST00000453800 265 ntBASIC4.02□□□□□ -1.77
CXCL1P09341 DNAJB5P1-201ENST00000454004 806 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms