Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC3.63□□□□□ -1.83
SND1-IT1Q9HBX3 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC3.63□□□□□ -1.83
SND1-IT1Q9HBX3 AC117490.2-201ENST00000610042 594 ntBASIC3.63□□□□□ -1.83
SND1-IT1Q9HBX3 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC3.63□□□□□ -1.83
SND1-IT1Q9HBX3 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC3.63□□□□□ -1.83
SND1-IT1Q9HBX3 AC007603.3-201ENST00000636915 979 ntBASIC3.63□□□□□ -1.83
SND1-IT1Q9HBX3 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
SND1-IT1Q9HBX3 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
SND1-IT1Q9HBX3 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SND1-IT1Q9HBX3 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
SND1-IT1Q9HBX3 AL731532.2-201ENST00000623542 1953 ntBASIC3.63□□□□□ -1.83
SND1-IT1Q9HBX3 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
SND1-IT1Q9HBX3 ZNF652P1-201ENST00000442420 1309 ntBASIC3.63□□□□□ -1.83
SND1-IT1Q9HBX3 EEF1A1P21-201ENST00000512363 1344 ntBASIC3.63□□□□□ -1.83
SND1-IT1Q9HBX3 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC3.63□□□□□ -1.83
SND1-IT1Q9HBX3 AC132825.1-201ENST00000463573 2247 ntBASIC3.63□□□□□ -1.83
SND1-IT1Q9HBX3 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SND1-IT1Q9HBX3 FTX-210ENST00000603037 8347 ntTSL 5 BASIC3.63□□□□□ -1.83
SND1-IT1Q9HBX3 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
SND1-IT1Q9HBX3 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SND1-IT1Q9HBX3 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC3.63□□□□□ -1.83
SND1-IT1Q9HBX3 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 AL731566.1-201ENST00000620490 1937 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 NXF4-202ENST00000416098 1465 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 AC000374.1-201ENST00000434698 1745 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 AL159987.1-201ENST00000347911 293 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 RNU1-19P-201ENST00000363306 165 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 SNORA51.9-201ENST00000384295 124 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 AL009179.1-201ENST00000406085 265 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 RNA5SP296-201ENST00000410523 111 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 CASKP1-201ENST00000412870 582 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 RPSAP35-201ENST00000413753 818 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 MRPL53P1-201ENST00000414323 319 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 TRIM60P17-201ENST00000415181 719 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 ARAFP1-201ENST00000422172 605 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 AC007383.1-201ENST00000445875 636 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 AL035551.1-201ENST00000446931 348 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 AC093166.3-201ENST00000448785 303 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 NPM1P19-201ENST00000450070 712 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 RNA5SP103-201ENST00000459503 118 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 RN7SL72P-201ENST00000460697 269 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 AL122020.1-201ENST00000472287 459 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 RPS12P31-201ENST00000491419 398 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 AC018639.1-201ENST00000492994 442 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 AK4P6-201ENST00000505168 528 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 SCARNA18.1-201ENST00000516330 83 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 RN7SKP238-201ENST00000516483 249 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 SCARNA6.1-201ENST00000516989 238 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 AC113191.1-201ENST00000517759 403 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 AP006245.2-201ENST00000522004 300 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 IGLV3-30-201ENST00000524362 298 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 AC109635.6-201ENST00000525487 1113 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 PCNAP4-201ENST00000532690 730 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 OR8X1P-201ENST00000534542 869 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 AC127381.1-201ENST00000555979 939 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 SULT1C2P2-201ENST00000562517 294 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 FAM27E4-201ENST00000605259 342 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 BNIP3P41-202ENST00000616656 861 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 MIR6823-201ENST00000622118 61 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 CCL14-204ENST00000622526 472 ntTSL 3 BASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 AC243960.7-201ENST00000623532 707 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 AC022306.1-201ENST00000560489 1562 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 UQCRC2P1-201ENST00000417777 1332 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 AC107027.3-201ENST00000565095 3473 ntBASIC3.62□□□□□ -1.83
SND1-IT1Q9HBX3 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms