Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.22□□□□□ -1.57
CLDN20P56880 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.22□□□□□ -1.57
CLDN20P56880 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.22□□□□□ -1.57
CLDN20P56880 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.22□□□□□ -1.57
CLDN20P56880 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.22□□□□□ -1.57
CLDN20P56880 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.22□□□□□ -1.57
CLDN20P56880 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
CLDN20P56880 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.22□□□□□ -1.57
CLDN20P56880 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.22□□□□□ -1.57
CLDN20P56880 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.22□□□□□ -1.57
CLDN20P56880 AC084824.2-201ENST00000548906 345 ntBASIC5.22□□□□□ -1.57
CLDN20P56880 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.22□□□□□ -1.57
CLDN20P56880 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
CLDN20P56880 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.22□□□□□ -1.57
CLDN20P56880 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.22□□□□□ -1.57
CLDN20P56880 AL590396.2-201ENST00000636511 1041 ntBASIC5.22□□□□□ -1.57
CLDN20P56880 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN20P56880 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN20P56880 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN20P56880 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN20P56880 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN20P56880 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN20P56880 LINC02019-201ENST00000608605 2060 ntBASIC5.22□□□□□ -1.57
CLDN20P56880 AC092111.2-201ENST00000611627 1414 ntBASIC5.22□□□□□ -1.57
CLDN20P56880 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.22□□□□□ -1.57
CLDN20P56880 FBXL21-201ENST00000297158 1305 ntBASIC5.22□□□□□ -1.57
CLDN20P56880 AL136520.1-201ENST00000600311 1322 ntBASIC5.22□□□□□ -1.57
CLDN20P56880 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CLDN20P56880 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.21□□□□□ -1.57
CLDN20P56880 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.21□□□□□ -1.57
CLDN20P56880 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
CLDN20P56880 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLDN20P56880 TMSB4XP4-201ENST00000323496 618 ntBASIC5.21□□□□□ -1.58
CLDN20P56880 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLDN20P56880 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CLDN20P56880 RNU6-609P-201ENST00000365459 107 ntBASIC5.21□□□□□ -1.58
CLDN20P56880 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLDN20P56880 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLDN20P56880 HMGB1P20-201ENST00000402555 677 ntBASIC5.21□□□□□ -1.58
CLDN20P56880 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.21□□□□□ -1.58
CLDN20P56880 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLDN20P56880 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLDN20P56880 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLDN20P56880 HMGB3P24-201ENST00000433260 622 ntBASIC5.21□□□□□ -1.58
CLDN20P56880 AC046176.1-201ENST00000435260 1170 ntBASIC5.21□□□□□ -1.58
CLDN20P56880 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CLDN20P56880 GAPDHP48-201ENST00000436626 961 ntBASIC5.21□□□□□ -1.58
CLDN20P56880 AC245517.2-201ENST00000442890 346 ntBASIC5.21□□□□□ -1.58
CLDN20P56880 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.21□□□□□ -1.58
CLDN20P56880 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.21□□□□□ -1.58
CLDN20P56880 FRG2FP-204ENST00000453982 852 ntBASIC5.21□□□□□ -1.58
CLDN20P56880 RPL12P39-201ENST00000455456 496 ntBASIC5.21□□□□□ -1.58
CLDN20P56880 SETP20-201ENST00000457046 852 ntBASIC5.21□□□□□ -1.58
CLDN20P56880 RNU1-88P-201ENST00000459274 128 ntBASIC5.21□□□□□ -1.58
CLDN20P56880 RPS23P6-201ENST00000466136 431 ntBASIC5.21□□□□□ -1.58
CLDN20P56880 AC078857.1-201ENST00000469870 667 ntBASIC5.21□□□□□ -1.58
CLDN20P56880 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC5.21□□□□□ -1.58
CLDN20P56880 PPIAP19-201ENST00000486414 492 ntBASIC5.21□□□□□ -1.58
CLDN20P56880 RPL23AP73-201ENST00000492507 471 ntBASIC5.21□□□□□ -1.58
CLDN20P56880 GOLGA5P1-201ENST00000507317 980 ntBASIC5.21□□□□□ -1.58
CLDN20P56880 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLDN20P56880 MTATP6P1-201ENST00000514057 681 ntBASIC5.21□□□□□ -1.58
CLDN20P56880 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.21□□□□□ -1.58
CLDN20P56880 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.21□□□□□ -1.58
CLDN20P56880 SCARNA6.1-201ENST00000516989 238 ntBASIC5.21□□□□□ -1.58
CLDN20P56880 AC139365.2-201ENST00000517972 253 ntBASIC5.21□□□□□ -1.58
CLDN20P56880 VTA1P2-201ENST00000520205 911 ntBASIC5.21□□□□□ -1.58
CLDN20P56880 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.21□□□□□ -1.58
CLDN20P56880 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLDN20P56880 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC5.21□□□□□ -1.58
CLDN20P56880 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.21□□□□□ -1.58
CLDN20P56880 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.21□□□□□ -1.58
CLDN20P56880 AC106785.3-201ENST00000564064 847 ntBASIC5.21□□□□□ -1.58
CLDN20P56880 MIR4433B-201ENST00000581329 102 ntBASIC5.21□□□□□ -1.58
CLDN20P56880 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.21□□□□□ -1.58
CLDN20P56880 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.21□□□□□ -1.58
CLDN20P56880 BNIP3P27-201ENST00000599991 412 ntBASIC5.21□□□□□ -1.58
CLDN20P56880 BNIP3P39-201ENST00000601077 554 ntBASIC5.21□□□□□ -1.58
CLDN20P56880 AL391001.1-201ENST00000602747 715 ntBASIC5.21□□□□□ -1.58
CLDN20P56880 AP004372.1-201ENST00000604842 844 ntBASIC5.21□□□□□ -1.58
CLDN20P56880 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.21□□□□□ -1.58
CLDN20P56880 AL096803.3-201ENST00000609032 532 ntBASIC5.21□□□□□ -1.58
CLDN20P56880 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.21□□□□□ -1.58
CLDN20P56880 MIR6133-201ENST00000617057 108 ntBASIC5.21□□□□□ -1.58
CLDN20P56880 RN7SL544P-201ENST00000617232 284 ntBASIC5.21□□□□□ -1.58
CLDN20P56880 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLDN20P56880 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.21□□□□□ -1.58
CLDN20P56880 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLDN20P56880 RN7SL763P-201ENST00000620922 284 ntBASIC5.21□□□□□ -1.58
CLDN20P56880 AC127024.6-201ENST00000621598 424 ntBASIC5.21□□□□□ -1.58
CLDN20P56880 AC015722.2-201ENST00000622210 551 ntBASIC5.21□□□□□ -1.58
CLDN20P56880 AC019080.5-201ENST00000624891 757 ntBASIC5.21□□□□□ -1.58
CLDN20P56880 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.21□□□□□ -1.58
CLDN20P56880 AC103703.1-201ENST00000634783 663 ntBASIC5.21□□□□□ -1.58
CLDN20P56880 AP000550.3-201ENST00000637734 379 ntBASIC5.21□□□□□ -1.58
CLDN20P56880 MIR193BHG-214ENST00000641765 509 ntBASIC5.21□□□□□ -1.58
CLDN20P56880 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
CLDN20P56880 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.21□□□□□ -1.58
CLDN20P56880 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLDN20P56880 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms