Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
VARSP26640 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
VARSP26640 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
VARSP26640 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
VARSP26640 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC7.62□□□□□ -1.19
VARSP26640 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
VARSP26640 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
VARSP26640 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
VARSP26640 CORIN-207ENST00000505909 3018 ntTSL 5 BASIC7.62□□□□□ -1.19
VARSP26640 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
VARSP26640 AL356361.1-201ENST00000400943 1459 ntBASIC7.62□□□□□ -1.19
VARSP26640 LINC01142-201ENST00000440404 1457 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
VARSP26640 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
VARSP26640 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
VARSP26640 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
VARSP26640 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
VARSP26640 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.61□□□□□ -1.19
VARSP26640 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.61□□□□□ -1.19
VARSP26640 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
VARSP26640 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
VARSP26640 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
VARSP26640 PLPPR1-202ENST00000395056 2318 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
VARSP26640 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC7.61□□□□□ -1.19
VARSP26640 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC7.61□□□□□ -1.19
VARSP26640 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
VARSP26640 TMSB4XP2-201ENST00000335179 210 ntBASIC7.61□□□□□ -1.19
VARSP26640 RNU6-451P-201ENST00000362921 107 ntBASIC7.61□□□□□ -1.19
VARSP26640 SNORA33.2-201ENST00000365413 134 ntBASIC7.61□□□□□ -1.19
VARSP26640 Y_RNA.401-201ENST00000383965 117 ntBASIC7.61□□□□□ -1.19
VARSP26640 RNU6-331P-201ENST00000384724 107 ntBASIC7.61□□□□□ -1.19
VARSP26640 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
VARSP26640 RN7SKP32-201ENST00000410167 303 ntBASIC7.61□□□□□ -1.19
VARSP26640 AL353193.1-201ENST00000421444 268 ntBASIC7.61□□□□□ -1.19
VARSP26640 RIMKLBP2-201ENST00000424737 654 ntBASIC7.61□□□□□ -1.19
VARSP26640 SKP1P3-201ENST00000429280 487 ntBASIC7.61□□□□□ -1.19
VARSP26640 PYHIN5P-201ENST00000431627 723 ntBASIC7.61□□□□□ -1.19
VARSP26640 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC7.61□□□□□ -1.19
VARSP26640 RPL7P54-201ENST00000438336 674 ntBASIC7.61□□□□□ -1.19
VARSP26640 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC7.61□□□□□ -1.19
VARSP26640 RPL7P12-201ENST00000446719 750 ntBASIC7.61□□□□□ -1.19
VARSP26640 RPL23AP20-201ENST00000447965 421 ntBASIC7.61□□□□□ -1.19
VARSP26640 RN7SL815P-201ENST00000470970 290 ntBASIC7.61□□□□□ -1.19
VARSP26640 RN7SL201P-201ENST00000482306 296 ntBASIC7.61□□□□□ -1.19
VARSP26640 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC7.61□□□□□ -1.19
VARSP26640 RN7SKP2-201ENST00000517003 319 ntBASIC7.61□□□□□ -1.19
VARSP26640 IGLVIV-59-201ENST00000520218 250 ntBASIC7.61□□□□□ -1.19
VARSP26640 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC7.61□□□□□ -1.19
VARSP26640 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC7.61□□□□□ -1.19
VARSP26640 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC7.61□□□□□ -1.19
VARSP26640 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC7.61□□□□□ -1.19
VARSP26640 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC7.61□□□□□ -1.19
VARSP26640 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC7.61□□□□□ -1.19
VARSP26640 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC7.61□□□□□ -1.19
VARSP26640 AC100830.2-201ENST00000581636 240 ntBASIC7.61□□□□□ -1.19
VARSP26640 RN7SL657P-201ENST00000582431 293 ntBASIC7.61□□□□□ -1.19
VARSP26640 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC7.61□□□□□ -1.19
VARSP26640 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC7.61□□□□□ -1.19
VARSP26640 OR7A18P-201ENST00000600416 277 ntBASIC7.61□□□□□ -1.19
VARSP26640 AC007621.1-201ENST00000604544 437 ntBASIC7.61□□□□□ -1.19
VARSP26640 AC005332.6-201ENST00000613178 446 ntBASIC7.61□□□□□ -1.19
VARSP26640 AC104010.1-201ENST00000616889 150 ntBASIC7.61□□□□□ -1.19
VARSP26640 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC7.61□□□□□ -1.19
VARSP26640 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
VARSP26640 C2orf27A-204ENST00000623058 969 ntBASIC7.61□□□□□ -1.19
VARSP26640 PISRT1-201ENST00000626175 531 ntBASIC7.61□□□□□ -1.19
VARSP26640 PCBP1-AS1-322ENST00000628147 553 ntTSL 5 BASIC7.61□□□□□ -1.19
VARSP26640 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC7.61□□□□□ -1.19
VARSP26640 AL022163.1-201ENST00000430261 1569 ntBASIC7.61□□□□□ -1.19
VARSP26640 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
VARSP26640 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC7.61□□□□□ -1.19
VARSP26640 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC7.61□□□□□ -1.19
VARSP26640 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
VARSP26640 HYDIN2-203ENST00000614586 13885 ntBASIC7.61□□□□□ -1.19
VARSP26640 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC7.61□□□□□ -1.19
VARSP26640 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC7.61□□□□□ -1.19
VARSP26640 ZNF300P1-201ENST00000356555 1822 ntBASIC7.61□□□□□ -1.19
VARSP26640 AC110716.2-201ENST00000563865 3945 ntBASIC7.61□□□□□ -1.19
VARSP26640 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
VARSP26640 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
VARSP26640 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
VARSP26640 AC021242.1-201ENST00000507315 2035 ntBASIC7.61□□□□□ -1.19
VARSP26640 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
VARSP26640 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
VARSP26640 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
VARSP26640 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
VARSP26640 RBBP4-206ENST00000458695 1674 ntTSL 2 BASIC7.6□□□□□ -1.19
VARSP26640 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
VARSP26640 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.6□□□□□ -1.19
VARSP26640 LAX1-202ENST00000367217 1356 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
VARSP26640 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
VARSP26640 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
VARSP26640 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
VARSP26640 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
VARSP26640 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
VARSP26640 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
VARSP26640 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
VARSP26640 OR51A10P-201ENST00000307165 937 ntBASIC7.6□□□□□ -1.19
VARSP26640 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
VARSP26640 Y_RNA.133-201ENST00000363428 110 ntBASIC7.6□□□□□ -1.19
VARSP26640 Y_RNA.315-201ENST00000365117 102 ntBASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms