Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.07□□□□□ -1.6
MT-ND1P03886 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
MT-ND1P03886 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
MT-ND1P03886 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
MT-ND1P03886 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
MT-ND1P03886 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
MT-ND1P03886 AL603750.1-201ENST00000624216 1717 ntBASIC5.07□□□□□ -1.6
MT-ND1P03886 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
MT-ND1P03886 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.07□□□□□ -1.6
MT-ND1P03886 COX5BP7-201ENST00000414780 274 ntBASIC5.07□□□□□ -1.6
MT-ND1P03886 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.07□□□□□ -1.6
MT-ND1P03886 AC017019.1-201ENST00000426129 261 ntBASIC5.07□□□□□ -1.6
MT-ND1P03886 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.07□□□□□ -1.6
MT-ND1P03886 HMGB3P24-201ENST00000433260 622 ntBASIC5.07□□□□□ -1.6
MT-ND1P03886 AC090018.1-201ENST00000434369 367 ntBASIC5.07□□□□□ -1.6
MT-ND1P03886 AC110602.1-201ENST00000437414 318 ntBASIC5.07□□□□□ -1.6
MT-ND1P03886 AL512637.1-201ENST00000439523 1231 ntBASIC5.07□□□□□ -1.6
MT-ND1P03886 AC016772.1-201ENST00000444170 1261 ntBASIC5.07□□□□□ -1.6
MT-ND1P03886 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.07□□□□□ -1.6
MT-ND1P03886 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
MT-ND1P03886 AP002884.1-201ENST00000479691 655 ntBASIC5.07□□□□□ -1.6
MT-ND1P03886 AC087672.1-201ENST00000479876 766 ntBASIC5.07□□□□□ -1.6
MT-ND1P03886 RN7SL273P-201ENST00000481561 299 ntBASIC5.07□□□□□ -1.6
MT-ND1P03886 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.07□□□□□ -1.6
MT-ND1P03886 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.07□□□□□ -1.6
MT-ND1P03886 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.07□□□□□ -1.6
MT-ND1P03886 AC114781.3-201ENST00000512083 142 ntBASIC5.07□□□□□ -1.6
MT-ND1P03886 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.07□□□□□ -1.6
MT-ND1P03886 SNORA70.20-201ENST00000516848 126 ntBASIC5.07□□□□□ -1.6
MT-ND1P03886 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.07□□□□□ -1.6
MT-ND1P03886 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.07□□□□□ -1.6
MT-ND1P03886 AC040958.1-201ENST00000561102 201 ntBASIC5.07□□□□□ -1.6
MT-ND1P03886 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
MT-ND1P03886 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.07□□□□□ -1.6
MT-ND1P03886 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
MT-ND1P03886 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.07□□□□□ -1.6
MT-ND1P03886 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
MT-ND1P03886 OR7M1P-201ENST00000608946 533 ntBASIC5.07□□□□□ -1.6
MT-ND1P03886 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.07□□□□□ -1.6
MT-ND1P03886 MIR7109-201ENST00000613748 65 ntBASIC5.07□□□□□ -1.6
MT-ND1P03886 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.07□□□□□ -1.6
MT-ND1P03886 RN7SL544P-201ENST00000617232 284 ntBASIC5.07□□□□□ -1.6
MT-ND1P03886 RN7SL763P-201ENST00000620922 284 ntBASIC5.07□□□□□ -1.6
MT-ND1P03886 AC243960.7-201ENST00000623532 707 ntBASIC5.07□□□□□ -1.6
MT-ND1P03886 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.07□□□□□ -1.6
MT-ND1P03886 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
MT-ND1P03886 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.07□□□□□ -1.6
MT-ND1P03886 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
MT-ND1P03886 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
MT-ND1P03886 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
MT-ND1P03886 AC133552.1-201ENST00000569988 4007 ntBASIC5.07□□□□□ -1.6
MT-ND1P03886 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.07□□□□□ -1.6
MT-ND1P03886 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
MT-ND1P03886 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
MT-ND1P03886 HSPA8P14-201ENST00000552265 1805 ntBASIC5.07□□□□□ -1.6
MT-ND1P03886 IFIT1P1-201ENST00000400497 1449 ntBASIC5.06□□□□□ -1.6
MT-ND1P03886 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.06□□□□□ -1.6
MT-ND1P03886 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
MT-ND1P03886 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.06□□□□□ -1.6
MT-ND1P03886 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.06□□□□□ -1.6
MT-ND1P03886 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
MT-ND1P03886 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
MT-ND1P03886 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
MT-ND1P03886 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
MT-ND1P03886 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
MT-ND1P03886 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.06□□□□□ -1.6
MT-ND1P03886 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.06□□□□□ -1.6
MT-ND1P03886 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
MT-ND1P03886 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
MT-ND1P03886 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
MT-ND1P03886 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
MT-ND1P03886 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.06□□□□□ -1.6
MT-ND1P03886 HMGB3P10-201ENST00000434734 572 ntBASIC5.06□□□□□ -1.6
MT-ND1P03886 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.06□□□□□ -1.6
MT-ND1P03886 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.06□□□□□ -1.6
MT-ND1P03886 RPL15P21-201ENST00000495592 567 ntBASIC5.06□□□□□ -1.6
MT-ND1P03886 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.06□□□□□ -1.6
MT-ND1P03886 SNORA48.9-201ENST00000516419 162 ntBASIC5.06□□□□□ -1.6
MT-ND1P03886 AC060775.1-201ENST00000518241 520 ntBASIC5.06□□□□□ -1.6
MT-ND1P03886 HMGB1P42-201ENST00000532126 553 ntBASIC5.06□□□□□ -1.6
MT-ND1P03886 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.06□□□□□ -1.6
MT-ND1P03886 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.06□□□□□ -1.6
MT-ND1P03886 AC068305.2-201ENST00000550567 1205 ntBASIC5.06□□□□□ -1.6
MT-ND1P03886 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.06□□□□□ -1.6
MT-ND1P03886 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.06□□□□□ -1.6
MT-ND1P03886 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.06□□□□□ -1.6
MT-ND1P03886 DPPA2P4-201ENST00000563717 878 ntBASIC5.06□□□□□ -1.6
MT-ND1P03886 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.06□□□□□ -1.6
MT-ND1P03886 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
MT-ND1P03886 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.06□□□□□ -1.6
MT-ND1P03886 AC009779.8-202ENST00000607990 932 ntBASIC5.06□□□□□ -1.6
MT-ND1P03886 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.06□□□□□ -1.6
MT-ND1P03886 AC073593.1-201ENST00000624500 411 ntBASIC5.06□□□□□ -1.6
MT-ND1P03886 AL390318.1-201ENST00000624564 687 ntBASIC5.06□□□□□ -1.6
MT-ND1P03886 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
MT-ND1P03886 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
MT-ND1P03886 RLIMP2-201ENST00000427891 1563 ntBASIC5.06□□□□□ -1.6
MT-ND1P03886 AC097461.1-201ENST00000568928 2821 ntBASIC5.06□□□□□ -1.6
MT-ND1P03886 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
MT-ND1P03886 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms