Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AC010325.3-201ENST00000641084 394 ntBASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 OR8A1-204ENST00000642111 1145 ntBASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 AC063976.2-201ENST00000425667 3556 ntBASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 AL606537.1-201ENST00000607258 2011 ntBASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 RN7SKP153-201ENST00000365026 316 ntBASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 EIF4A1P1-201ENST00000420241 934 ntBASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 VN1R20P-201ENST00000425215 966 ntBASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 NPM1P22-201ENST00000427761 952 ntBASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 RBMY2TP-201ENST00000451162 947 ntBASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 RPL12P30-201ENST00000488389 499 ntBASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 RN7SL568P-201ENST00000493069 298 ntBASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 RN7SKP34-201ENST00000516142 244 ntBASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 RN7SKP183-201ENST00000517169 324 ntBASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 AC036111.2-201ENST00000533247 901 ntBASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 DUX4L52-201ENST00000549363 777 ntBASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 WBP1LP12-201ENST00000604449 331 ntBASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 MIR7109-201ENST00000613748 65 ntBASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 CASC19-274ENST00000642018 970 ntBASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 AP001273.1-201ENST00000624493 3152 ntBASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC4.22□□□□□ -1.73
RBFOX3A6NFN3 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.21□□□□□ -1.73
RBFOX3A6NFN3 RBPJP2-201ENST00000618187 1444 ntBASIC4.21□□□□□ -1.73
RBFOX3A6NFN3 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.21□□□□□ -1.73
RBFOX3A6NFN3 MAPK10-320ENST00000641462 6696 ntBASIC4.21□□□□□ -1.73
RBFOX3A6NFN3 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
RBFOX3A6NFN3 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
RBFOX3A6NFN3 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 RNA5SP110-201ENST00000362638 115 ntBASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 AC013429.2-201ENST00000418798 781 ntBASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 RPS26P4-201ENST00000431743 355 ntBASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 AC092447.2-201ENST00000435487 669 ntBASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 H3F3AP5-201ENST00000475267 429 ntBASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 RN7SL583P-201ENST00000475692 287 ntBASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 OR9N1P-201ENST00000491296 333 ntBASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 APOBEC3AP1-201ENST00000511396 287 ntBASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC4.21□□□□□ -1.74
RBFOX3A6NFN3 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms