Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
RCCD1A6NED2 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
RCCD1A6NED2 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
RCCD1A6NED2 AC025574.1-201ENST00000554784 1653 ntBASIC8.13□□□□□ -1.11
RCCD1A6NED2 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RCCD1A6NED2 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC8.13□□□□□ -1.11
RCCD1A6NED2 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC8.13□□□□□ -1.11
RCCD1A6NED2 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RCCD1A6NED2 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
RCCD1A6NED2 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RCCD1A6NED2 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RCCD1A6NED2 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RCCD1A6NED2 AFG1L-201ENST00000368977 5208 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RCCD1A6NED2 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RCCD1A6NED2 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RCCD1A6NED2 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
RCCD1A6NED2 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RCCD1A6NED2 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RCCD1A6NED2 GLRA4-201ENST00000372617 1795 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
RCCD1A6NED2 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
RCCD1A6NED2 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RCCD1A6NED2 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RCCD1A6NED2 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
RCCD1A6NED2 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
RCCD1A6NED2 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RCCD1A6NED2 AC096992.2-201ENST00000609553 1684 ntBASIC8.12□□□□□ -1.11
RCCD1A6NED2 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
RCCD1A6NED2 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC8.12□□□□□ -1.11
RCCD1A6NED2 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
RCCD1A6NED2 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
RCCD1A6NED2 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
RCCD1A6NED2 RNA5SP389-201ENST00000362610 115 ntBASIC8.12□□□□□ -1.11
RCCD1A6NED2 RNA5SP226-201ENST00000362653 115 ntBASIC8.12□□□□□ -1.11
RCCD1A6NED2 RNA5SP161-201ENST00000363871 115 ntBASIC8.12□□□□□ -1.11
RCCD1A6NED2 Y_RNA.259-201ENST00000364619 101 ntBASIC8.12□□□□□ -1.11
RCCD1A6NED2 RNA5SP149-201ENST00000364952 92 ntBASIC8.12□□□□□ -1.11
RCCD1A6NED2 GSTM1-203ENST00000369819 790 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RCCD1A6NED2 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC8.12□□□□□ -1.11
RCCD1A6NED2 MT-TP-201ENST00000387461 68 ntBASIC8.12□□□□□ -1.11
RCCD1A6NED2 AL356057.3-201ENST00000402607 340 ntBASIC8.12□□□□□ -1.11
RCCD1A6NED2 MAST4-207ENST00000407621 559 ntTSL 2 BASIC8.12□□□□□ -1.11
RCCD1A6NED2 AC004986.1-201ENST00000414855 607 ntBASIC8.12□□□□□ -1.11
RCCD1A6NED2 RPL4P4-201ENST00000422486 1284 ntBASIC8.12□□□□□ -1.11
RCCD1A6NED2 AL356387.1-201ENST00000426321 476 ntTSL 3 BASIC8.12□□□□□ -1.11
RCCD1A6NED2 OR51AB1P-201ENST00000429046 620 ntBASIC8.12□□□□□ -1.11
RCCD1A6NED2 MRLN-202ENST00000430431 495 ntAPPRIS P2 TSL 2 BASIC8.12□□□□□ -1.11
RCCD1A6NED2 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
RCCD1A6NED2 AL591212.2-201ENST00000433923 257 ntBASIC8.12□□□□□ -1.11
RCCD1A6NED2 RPL17P49-201ENST00000443728 411 ntBASIC8.12□□□□□ -1.11
RCCD1A6NED2 AL451081.2-201ENST00000448115 933 ntBASIC8.12□□□□□ -1.11
RCCD1A6NED2 RNU6-261P-201ENST00000459506 102 ntBASIC8.12□□□□□ -1.11
RCCD1A6NED2 RN7SL751P-201ENST00000473281 284 ntBASIC8.12□□□□□ -1.11
RCCD1A6NED2 AC017015.1-201ENST00000477387 286 ntBASIC8.12□□□□□ -1.11
RCCD1A6NED2 AL355076.1-201ENST00000484315 270 ntBASIC8.12□□□□□ -1.11
RCCD1A6NED2 BTF3P13-201ENST00000513224 490 ntBASIC8.12□□□□□ -1.11
RCCD1A6NED2 Y_RNA.691-201ENST00000516611 103 ntBASIC8.12□□□□□ -1.11
RCCD1A6NED2 RAD21-204ENST00000518055 896 ntTSL 2 BASIC8.12□□□□□ -1.11
RCCD1A6NED2 IGHV3-63-201ENST00000518422 341 ntBASIC8.12□□□□□ -1.11
RCCD1A6NED2 OR5B19P-201ENST00000531766 928 ntBASIC8.12□□□□□ -1.11
RCCD1A6NED2 DERA-209ENST00000532964 854 ntTSL 5 BASIC8.12□□□□□ -1.11
RCCD1A6NED2 AC023050.3-201ENST00000541142 333 ntBASIC8.12□□□□□ -1.11
RCCD1A6NED2 AC018630.1-201ENST00000541376 925 ntBASIC8.12□□□□□ -1.11
RCCD1A6NED2 PRPSAP2-217ENST00000542013 1047 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RCCD1A6NED2 PDCD5P1-201ENST00000543528 309 ntBASIC8.12□□□□□ -1.11
RCCD1A6NED2 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC8.12□□□□□ -1.11
RCCD1A6NED2 NMNAT1P1-201ENST00000554095 876 ntBASIC8.12□□□□□ -1.11
RCCD1A6NED2 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC8.12□□□□□ -1.11
RCCD1A6NED2 DNAJC8P1-201ENST00000554535 372 ntBASIC8.12□□□□□ -1.11
RCCD1A6NED2 AC004817.2-201ENST00000561794 651 ntBASIC8.12□□□□□ -1.11
RCCD1A6NED2 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC8.12□□□□□ -1.11
RCCD1A6NED2 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RCCD1A6NED2 AP001180.3-201ENST00000582221 145 ntBASIC8.12□□□□□ -1.11
RCCD1A6NED2 RN7SL178P-201ENST00000582930 304 ntBASIC8.12□□□□□ -1.11
RCCD1A6NED2 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC8.12□□□□□ -1.11
RCCD1A6NED2 AL953862.2-201ENST00000603089 820 ntBASIC8.12□□□□□ -1.11
RCCD1A6NED2 AL021808.1-201ENST00000604325 1117 ntBASIC8.12□□□□□ -1.11
RCCD1A6NED2 MIR7162-201ENST00000611134 69 ntBASIC8.12□□□□□ -1.11
RCCD1A6NED2 AC093913.1-201ENST00000614178 329 ntBASIC8.12□□□□□ -1.11
RCCD1A6NED2 AL356585.4-201ENST00000623078 1229 ntBASIC8.12□□□□□ -1.11
RCCD1A6NED2 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC8.12□□□□□ -1.11
RCCD1A6NED2 AC026108.1-201ENST00000635444 547 ntBASIC8.12□□□□□ -1.11
RCCD1A6NED2 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RCCD1A6NED2 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC8.12□□□□□ -1.11
RCCD1A6NED2 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC8.12□□□□□ -1.11
RCCD1A6NED2 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
RCCD1A6NED2 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC8.12□□□□□ -1.11
RCCD1A6NED2 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC8.12□□□□□ -1.11
RCCD1A6NED2 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
RCCD1A6NED2 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RCCD1A6NED2 CDC42-201ENST00000315554 1452 ntAPPRIS P5 TSL 1 (best) BASIC8.12□□□□□ -1.11
RCCD1A6NED2 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC8.12□□□□□ -1.11
RCCD1A6NED2 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RCCD1A6NED2 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC8.11□□□□□ -1.11
RCCD1A6NED2 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RCCD1A6NED2 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RCCD1A6NED2 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RCCD1A6NED2 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RCCD1A6NED2 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
RCCD1A6NED2 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RCCD1A6NED2 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms