Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 DCLRE1C-204ENST00000378246 2637 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
LHX6Q9UPM6 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
LHX6Q9UPM6 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LHX6Q9UPM6 ERG-210ENST00000442448 5034 ntTSL 5 BASIC8.04□□□□□ -1.12
LHX6Q9UPM6 CD59-203ENST00000415002 1878 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
LHX6Q9UPM6 VSIG1-202ENST00000415430 3236 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
LHX6Q9UPM6 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
LHX6Q9UPM6 ABHD3-205ENST00000578270 2080 ntTSL 5 BASIC8.04□□□□□ -1.12
LHX6Q9UPM6 SLC9A6-209ENST00000636347 4867 ntTSL 5 BASIC8.04□□□□□ -1.12
LHX6Q9UPM6 ANO4-207ENST00000550015 2293 ntTSL 2 BASIC8.04□□□□□ -1.12
LHX6Q9UPM6 KCTD19-201ENST00000304372 2958 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LHX6Q9UPM6 SLC24A1-211ENST00000544319 3169 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
LHX6Q9UPM6 BRDT-205ENST00000399546 3357 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
LHX6Q9UPM6 GTF3C2-202ENST00000359541 3992 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 CRNKL1-201ENST00000377327 4370 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 UGT2B27P-201ENST00000505092 1620 ntBASIC8.03□□□□□ -1.12
LHX6Q9UPM6 SETD7-207ENST00000608958 5281 ntTSL 5 BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 TARS-204ENST00000502553 2534 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 MYO1A-201ENST00000300119 3621 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 SIRT5-205ENST00000606117 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 PCDH15-229ENST00000616114 5846 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 AOAH-211ENST00000617537 2381 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 LINC01719-204ENST00000611275 2054 ntTSL 5 BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 FGB-201ENST00000302068 1975 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 NXPE1-201ENST00000251921 1888 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 WDR19-201ENST00000399820 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 SNORD113-7-201ENST00000363762 77 ntBASIC8.03□□□□□ -1.12
LHX6Q9UPM6 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 LDHAP4-201ENST00000397561 998 ntBASIC8.03□□□□□ -1.12
LHX6Q9UPM6 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 NDUFS5P1-201ENST00000405668 289 ntBASIC8.03□□□□□ -1.12
LHX6Q9UPM6 AL606923.1-201ENST00000406616 190 ntBASIC8.03□□□□□ -1.12
LHX6Q9UPM6 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 AL672212.1-201ENST00000422246 400 ntBASIC8.03□□□□□ -1.12
LHX6Q9UPM6 RPL7L1P10-201ENST00000427790 463 ntBASIC8.03□□□□□ -1.12
LHX6Q9UPM6 PSMA6P3-201ENST00000428242 164 ntBASIC8.03□□□□□ -1.12
LHX6Q9UPM6 NR1I3-209ENST00000428574 1117 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 AL731534.1-201ENST00000434711 269 ntBASIC8.03□□□□□ -1.12
LHX6Q9UPM6 NEFLP1-201ENST00000436364 984 ntBASIC8.03□□□□□ -1.12
LHX6Q9UPM6 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 MTND1P17-201ENST00000448961 204 ntBASIC8.03□□□□□ -1.12
LHX6Q9UPM6 AC092569.1-201ENST00000455192 258 ntBASIC8.03□□□□□ -1.12
LHX6Q9UPM6 LINC00489-201ENST00000457816 543 ntTSL 5 BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 RN7SL282P-201ENST00000479676 297 ntBASIC8.03□□□□□ -1.12
LHX6Q9UPM6 RN7SL741P-201ENST00000482473 289 ntBASIC8.03□□□□□ -1.12
LHX6Q9UPM6 OR9A1P-202ENST00000484361 945 ntBASIC8.03□□□□□ -1.12
LHX6Q9UPM6 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 AC244505.1-201ENST00000502642 307 ntBASIC8.03□□□□□ -1.12
LHX6Q9UPM6 HSPD1P15-201ENST00000505573 1122 ntBASIC8.03□□□□□ -1.12
LHX6Q9UPM6 AC034207.1-201ENST00000506742 948 ntBASIC8.03□□□□□ -1.12
LHX6Q9UPM6 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 AC113355.1-201ENST00000510512 491 ntTSL 3 BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 LINC02021-203ENST00000514145 569 ntTSL 4 BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 IGHV3-63-201ENST00000518422 341 ntBASIC8.03□□□□□ -1.12
LHX6Q9UPM6 IGLC5-201ENST00000519670 293 ntBASIC8.03□□□□□ -1.12
LHX6Q9UPM6 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 LINC01499-201ENST00000528720 553 ntTSL 4 BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 REG4-204ENST00000530654 612 ntTSL 5 BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 AC106028.1-201ENST00000554322 526 ntBASIC8.03□□□□□ -1.12
LHX6Q9UPM6 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 AC007785.1-201ENST00000597989 332 ntTSL 5 BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 AL078624.2-201ENST00000605063 554 ntBASIC8.03□□□□□ -1.12
LHX6Q9UPM6 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 TRIM37-214ENST00000625984 204 ntTSL 5 BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 AL732372.2-225ENST00000642124 456 ntBASIC8.03□□□□□ -1.12
LHX6Q9UPM6 ADGRG6-201ENST00000230173 7026 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 PIK3R1-202ENST00000336483 2439 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 NAIP-204ENST00000503719 5347 ntTSL 5 BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 PIGN-201ENST00000357637 4723 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 OGDH-210ENST00000631326 4116 ntTSL 5 BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 EYA4-213ENST00000531901 2892 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 AC079178.2-201ENST00000439323 1624 ntBASIC8.03□□□□□ -1.12
LHX6Q9UPM6 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 AC008966.1-203ENST00000499459 3137 ntTSL 2 BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 CD300LD-201ENST00000375352 1303 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LHX6Q9UPM6 R3HDM2P1-201ENST00000505381 1960 ntBASIC8.02□□□□□ -1.12
LHX6Q9UPM6 SP140L-201ENST00000243810 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.12
LHX6Q9UPM6 MYH2-204ENST00000532183 2528 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
LHX6Q9UPM6 INTS6-215ENST00000490542 2307 ntTSL 5 BASIC8.02□□□□□ -1.13
LHX6Q9UPM6 CACNA1D-202ENST00000350061 7636 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
LHX6Q9UPM6 CA5B-204ENST00000454127 2205 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
LHX6Q9UPM6 CTNNA2-217ENST00000540488 2792 ntTSL 5 BASIC8.02□□□□□ -1.13
LHX6Q9UPM6 B4GALT6-202ENST00000306851 3891 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
LHX6Q9UPM6 ZNF714-201ENST00000425625 2562 ntTSL 5 BASIC8.02□□□□□ -1.13
LHX6Q9UPM6 NLRP4-201ENST00000301295 3670 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms