Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 AL136131.3-201ENST00000607600 188 ntBASIC5.42□□□□□ -1.54
VPS33AQ96AX1 AL162574.1-201ENST00000615702 950 ntBASIC5.42□□□□□ -1.54
VPS33AQ96AX1 AC003001.2-201ENST00000616294 831 ntBASIC5.42□□□□□ -1.54
VPS33AQ96AX1 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 AC021766.1-201ENST00000624404 741 ntBASIC5.42□□□□□ -1.54
VPS33AQ96AX1 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 AC111152.1-202ENST00000635848 339 ntBASIC5.42□□□□□ -1.54
VPS33AQ96AX1 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 AC006206.1-201ENST00000544842 3387 ntBASIC5.42□□□□□ -1.54
VPS33AQ96AX1 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VPS33AQ96AX1 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 OR4F13P-202ENST00000560066 2054 ntBASIC5.41□□□□□ -1.54
VPS33AQ96AX1 DDX6P1-205ENST00000441966 1436 ntBASIC5.41□□□□□ -1.54
VPS33AQ96AX1 CASC19-284ENST00000642142 1868 ntBASIC5.41□□□□□ -1.54
VPS33AQ96AX1 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 RNFT1P3-201ENST00000340898 1052 ntBASIC5.41□□□□□ -1.54
VPS33AQ96AX1 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 RNU1-146P-201ENST00000364015 165 ntBASIC5.41□□□□□ -1.54
VPS33AQ96AX1 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 MIR191-201ENST00000384873 92 ntBASIC5.41□□□□□ -1.54
VPS33AQ96AX1 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 TMEM183AP1-205ENST00000432739 290 ntBASIC5.41□□□□□ -1.54
VPS33AQ96AX1 CYCSP11-201ENST00000436426 315 ntBASIC5.41□□□□□ -1.54
VPS33AQ96AX1 EIF5AP4-201ENST00000441206 465 ntBASIC5.41□□□□□ -1.54
VPS33AQ96AX1 AC097463.1-201ENST00000447288 481 ntBASIC5.41□□□□□ -1.54
VPS33AQ96AX1 PSAT1P4-201ENST00000466500 526 ntBASIC5.41□□□□□ -1.54
VPS33AQ96AX1 RPSAP37-201ENST00000470913 821 ntBASIC5.41□□□□□ -1.54
VPS33AQ96AX1 AC098847.1-201ENST00000473094 348 ntBASIC5.41□□□□□ -1.54
VPS33AQ96AX1 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 MRPS5P3-201ENST00000515577 166 ntBASIC5.41□□□□□ -1.54
VPS33AQ96AX1 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.41□□□□□ -1.54
VPS33AQ96AX1 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 AC122688.1-201ENST00000541494 223 ntBASIC5.41□□□□□ -1.54
VPS33AQ96AX1 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 AC006530.1-201ENST00000555980 571 ntBASIC5.41□□□□□ -1.54
VPS33AQ96AX1 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 AGGF1P7-201ENST00000562369 913 ntBASIC5.41□□□□□ -1.54
VPS33AQ96AX1 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 COX6CP7-201ENST00000597056 208 ntBASIC5.41□□□□□ -1.54
VPS33AQ96AX1 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 MIR6721-201ENST00000617181 87 ntBASIC5.41□□□□□ -1.54
VPS33AQ96AX1 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 QRSL1P1-201ENST00000400977 1540 ntBASIC5.41□□□□□ -1.54
VPS33AQ96AX1 LYARP1-201ENST00000436977 1501 ntBASIC5.41□□□□□ -1.54
VPS33AQ96AX1 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 HSPD1P9-201ENST00000420325 1636 ntBASIC5.41□□□□□ -1.54
VPS33AQ96AX1 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS33AQ96AX1 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VPS33AQ96AX1 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.4□□□□□ -1.54
VPS33AQ96AX1 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VPS33AQ96AX1 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
VPS33AQ96AX1 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VPS33AQ96AX1 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.4□□□□□ -1.54
VPS33AQ96AX1 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.4□□□□□ -1.54
VPS33AQ96AX1 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VPS33AQ96AX1 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
VPS33AQ96AX1 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VPS33AQ96AX1 AC107977.1-201ENST00000355745 939 ntBASIC5.4□□□□□ -1.54
VPS33AQ96AX1 RN7SKP250-201ENST00000363924 321 ntBASIC5.4□□□□□ -1.54
VPS33AQ96AX1 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.4□□□□□ -1.54
VPS33AQ96AX1 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VPS33AQ96AX1 OR1F12-201ENST00000402365 945 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 2527.1 ms