Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 AC025857.2-201ENST00000602711 238 ntBASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 AP001005.3-201ENST00000622049 129 ntBASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 AC105105.5-201ENST00000622635 1294 ntBASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 AP003499.2-201ENST00000624100 483 ntBASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 AC000095.2-202ENST00000637415 154 ntBASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 MRRFP1-201ENST00000435941 1675 ntBASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 AP001002.1-201ENST00000625148 1513 ntBASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 RNU1-49P-201ENST00000363468 159 ntBASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 RN7SKP128-201ENST00000364270 303 ntBASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 RPS3AP2-201ENST00000407190 754 ntBASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 RPA2P2-201ENST00000419698 796 ntBASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 GLUD1P9-201ENST00000420997 1173 ntBASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 AC002127.1-201ENST00000421305 225 ntBASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 SRSF1P1-201ENST00000424058 520 ntBASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 MRPS21P2-201ENST00000424704 264 ntBASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 RPL12P18-201ENST00000437175 325 ntBASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 PPIAP10-201ENST00000438675 458 ntBASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 SOCS5P1-201ENST00000440415 949 ntBASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 ZNF736P11Y-201ENST00000442535 1213 ntBASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 ZNF736P12Y-201ENST00000443152 1243 ntBASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 AL450996.1-201ENST00000445574 1202 ntBASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 MTND5P8-201ENST00000449817 1083 ntBASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 AL645937.3-201ENST00000453647 936 ntBASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 RN7SL72P-201ENST00000460697 269 ntBASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 OR4D12P-201ENST00000509361 911 ntBASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 TOMM22P4-201ENST00000511318 336 ntBASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 TPM3P3-201ENST00000521343 354 ntBASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 AC008055.1-201ENST00000547032 609 ntBASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 AC007956.1-201ENST00000555623 542 ntBASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 CD24P2-201ENST00000565486 219 ntBASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 MIMT1-201ENST00000597105 1050 ntBASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 AL591167.1-201ENST00000607321 456 ntBASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 AC135803.1-201ENST00000608748 565 ntBASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 AC004241.3-201ENST00000611728 517 ntBASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 AC015922.4-201ENST00000612568 690 ntBASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 AC004801.6-201ENST00000616571 978 ntBASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 AC106730.3-201ENST00000624568 641 ntBASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 DRG1-207ENST00000629688 309 ntTSL 5 BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 OR5AC4P-202ENST00000642086 985 ntBASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PDLIM3Q53GG5 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 AL354854.1-201ENST00000455940 1363 ntBASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.91□□□□□ -1.62
PDLIM3Q53GG5 STX3-208ENST00000641815 3236 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms