Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC120338.1-201ENST00000625074 1541 ntBASIC4.17□□□□□ -1.74
HIST1H1AQ02539 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HIST1H1AQ02539 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HIST1H1AQ02539 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
HIST1H1AQ02539 GAPDHP24-201ENST00000328713 983 ntBASIC4.17□□□□□ -1.74
HIST1H1AQ02539 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
HIST1H1AQ02539 AC017079.1-201ENST00000333650 415 ntBASIC4.17□□□□□ -1.74
HIST1H1AQ02539 SNORA64.1-201ENST00000362600 132 ntBASIC4.17□□□□□ -1.74
HIST1H1AQ02539 RNA5SP241-201ENST00000391326 114 ntBASIC4.17□□□□□ -1.74
HIST1H1AQ02539 AL009179.1-201ENST00000406085 265 ntBASIC4.17□□□□□ -1.74
HIST1H1AQ02539 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC4.17□□□□□ -1.74
HIST1H1AQ02539 AC245060.4-201ENST00000413293 1121 ntBASIC4.17□□□□□ -1.74
HIST1H1AQ02539 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.17□□□□□ -1.74
HIST1H1AQ02539 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.17□□□□□ -1.74
HIST1H1AQ02539 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.17□□□□□ -1.74
HIST1H1AQ02539 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC4.17□□□□□ -1.74
HIST1H1AQ02539 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.17□□□□□ -1.74
HIST1H1AQ02539 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC4.17□□□□□ -1.74
HIST1H1AQ02539 ARAFP2-201ENST00000440565 559 ntBASIC4.17□□□□□ -1.74
HIST1H1AQ02539 GTF3AP5-201ENST00000442645 697 ntBASIC4.17□□□□□ -1.74
HIST1H1AQ02539 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HIST1H1AQ02539 AL596266.1-201ENST00000448132 400 ntBASIC4.17□□□□□ -1.74
HIST1H1AQ02539 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC4.17□□□□□ -1.74
HIST1H1AQ02539 HLA-DPA3-207ENST00000454398 229 ntBASIC4.17□□□□□ -1.74
HIST1H1AQ02539 TAAR4P-201ENST00000454843 1039 ntBASIC4.17□□□□□ -1.74
HIST1H1AQ02539 AC021660.1-201ENST00000465006 554 ntBASIC4.17□□□□□ -1.74
HIST1H1AQ02539 RN7SL170P-201ENST00000487098 295 ntBASIC4.17□□□□□ -1.74
HIST1H1AQ02539 RN7SL649P-201ENST00000496974 275 ntBASIC4.17□□□□□ -1.74
HIST1H1AQ02539 MYL12BP2-201ENST00000503948 512 ntBASIC4.17□□□□□ -1.74
HIST1H1AQ02539 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.17□□□□□ -1.74
HIST1H1AQ02539 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.17□□□□□ -1.74
HIST1H1AQ02539 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.17□□□□□ -1.74
HIST1H1AQ02539 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.17□□□□□ -1.74
HIST1H1AQ02539 RPS27AP18-201ENST00000515536 459 ntBASIC4.17□□□□□ -1.74
HIST1H1AQ02539 HMGB1P19-201ENST00000517578 577 ntBASIC4.17□□□□□ -1.74
HIST1H1AQ02539 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.17□□□□□ -1.74
HIST1H1AQ02539 AP006245.2-201ENST00000522004 300 ntBASIC4.17□□□□□ -1.74
HIST1H1AQ02539 HMGB1P42-201ENST00000532126 553 ntBASIC4.17□□□□□ -1.74
HIST1H1AQ02539 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.17□□□□□ -1.74
HIST1H1AQ02539 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.17□□□□□ -1.74
HIST1H1AQ02539 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.17□□□□□ -1.74
HIST1H1AQ02539 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HIST1H1AQ02539 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HIST1H1AQ02539 AC067773.1-201ENST00000603284 1094 ntBASIC4.17□□□□□ -1.74
HIST1H1AQ02539 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
HIST1H1AQ02539 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.17□□□□□ -1.74
HIST1H1AQ02539 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC4.17□□□□□ -1.74
HIST1H1AQ02539 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
HIST1H1AQ02539 AC093775.1-201ENST00000624154 1868 ntBASIC4.17□□□□□ -1.74
HIST1H1AQ02539 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HIST1H1AQ02539 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.17□□□□□ -1.74
HIST1H1AQ02539 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.17□□□□□ -1.74
HIST1H1AQ02539 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.17□□□□□ -1.74
HIST1H1AQ02539 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HIST1H1AQ02539 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HIST1H1AQ02539 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.17□□□□□ -1.74
HIST1H1AQ02539 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
HIST1H1AQ02539 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
HIST1H1AQ02539 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
HIST1H1AQ02539 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HIST1H1AQ02539 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HIST1H1AQ02539 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
HIST1H1AQ02539 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.16□□□□□ -1.74
HIST1H1AQ02539 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC4.16□□□□□ -1.74
HIST1H1AQ02539 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.16□□□□□ -1.74
HIST1H1AQ02539 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.16□□□□□ -1.74
HIST1H1AQ02539 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
HIST1H1AQ02539 AL606537.1-201ENST00000607258 2011 ntBASIC4.16□□□□□ -1.74
HIST1H1AQ02539 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.16□□□□□ -1.74
HIST1H1AQ02539 AL034370.1-201ENST00000397254 1590 ntBASIC4.16□□□□□ -1.74
HIST1H1AQ02539 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.16□□□□□ -1.74
HIST1H1AQ02539 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HIST1H1AQ02539 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.16□□□□□ -1.74
HIST1H1AQ02539 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HIST1H1AQ02539 RNU1-150P-201ENST00000362491 162 ntBASIC4.16□□□□□ -1.74
HIST1H1AQ02539 UBBP2-201ENST00000376781 231 ntBASIC4.16□□□□□ -1.74
HIST1H1AQ02539 MIR1271-201ENST00000408537 86 ntBASIC4.16□□□□□ -1.74
HIST1H1AQ02539 RPSAP35-201ENST00000413753 818 ntBASIC4.16□□□□□ -1.74
HIST1H1AQ02539 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC4.16□□□□□ -1.74
HIST1H1AQ02539 NENFP1-201ENST00000419476 466 ntBASIC4.16□□□□□ -1.74
HIST1H1AQ02539 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.16□□□□□ -1.74
HIST1H1AQ02539 AC012519.1-201ENST00000424588 610 ntBASIC4.16□□□□□ -1.74
HIST1H1AQ02539 AC115283.1-201ENST00000427353 400 ntBASIC4.16□□□□□ -1.74
HIST1H1AQ02539 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.16□□□□□ -1.74
HIST1H1AQ02539 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC4.16□□□□□ -1.74
HIST1H1AQ02539 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC4.16□□□□□ -1.74
HIST1H1AQ02539 AC006335.2-201ENST00000437993 330 ntBASIC4.16□□□□□ -1.74
HIST1H1AQ02539 AL512637.1-201ENST00000439523 1231 ntBASIC4.16□□□□□ -1.74
HIST1H1AQ02539 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.16□□□□□ -1.74
HIST1H1AQ02539 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.16□□□□□ -1.74
HIST1H1AQ02539 RPL7L1P1-201ENST00000448259 785 ntBASIC4.16□□□□□ -1.74
HIST1H1AQ02539 AC245028.2-201ENST00000458673 253 ntBASIC4.16□□□□□ -1.74
HIST1H1AQ02539 RPS17P15-201ENST00000475609 349 ntBASIC4.16□□□□□ -1.74
HIST1H1AQ02539 AK6-203ENST00000502819 743 ntTSL 5 BASIC4.16□□□□□ -1.74
HIST1H1AQ02539 AC109481.1-201ENST00000509173 282 ntBASIC4.16□□□□□ -1.74
HIST1H1AQ02539 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.16□□□□□ -1.74
HIST1H1AQ02539 AC006499.4-201ENST00000510947 694 ntBASIC4.16□□□□□ -1.74
HIST1H1AQ02539 AC091912.1-201ENST00000511351 248 ntBASIC4.16□□□□□ -1.74
HIST1H1AQ02539 AC060775.1-201ENST00000518241 520 ntBASIC4.16□□□□□ -1.74
HIST1H1AQ02539 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms