Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.52□□□□□ -1.53
BRCA2P51587 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.52□□□□□ -1.53
BRCA2P51587 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.52□□□□□ -1.53
BRCA2P51587 PKD1L3-201ENST00000620267 5199 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
BRCA2P51587 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
BRCA2P51587 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
BRCA2P51587 AC006210.2-201ENST00000367074 1545 ntBASIC5.52□□□□□ -1.53
BRCA2P51587 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.51□□□□□ -1.53
BRCA2P51587 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
BRCA2P51587 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
BRCA2P51587 RNA5SP509-201ENST00000364577 119 ntBASIC5.51□□□□□ -1.53
BRCA2P51587 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.51□□□□□ -1.53
BRCA2P51587 OR8A2P-201ENST00000528631 952 ntBASIC5.51□□□□□ -1.53
BRCA2P51587 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.51□□□□□ -1.53
BRCA2P51587 NMNAT1P1-201ENST00000554095 876 ntBASIC5.51□□□□□ -1.53
BRCA2P51587 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.51□□□□□ -1.53
BRCA2P51587 AC090948.1-201ENST00000607464 549 ntBASIC5.51□□□□□ -1.53
BRCA2P51587 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.51□□□□□ -1.53
BRCA2P51587 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
BRCA2P51587 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
BRCA2P51587 DDI2-202ENST00000480945 10625 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
BRCA2P51587 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
BRCA2P51587 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
BRCA2P51587 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.51□□□□□ -1.53
BRCA2P51587 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
BRCA2P51587 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
BRCA2P51587 SEMA5A-201ENST00000382496 11762 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
BRCA2P51587 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
BRCA2P51587 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
BRCA2P51587 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
BRCA2P51587 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.51□□□□□ -1.53
BRCA2P51587 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
BRCA2P51587 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.51□□□□□ -1.53
BRCA2P51587 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.51□□□□□ -1.53
BRCA2P51587 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
BRCA2P51587 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.51□□□□□ -1.53
BRCA2P51587 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
BRCA2P51587 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
BRCA2P51587 AMOTL1-203ENST00000433060 8970 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
BRCA2P51587 OR1L6-202ENST00000373684 1044 ntBASIC5.51□□□□□ -1.53
BRCA2P51587 CYCSP19-201ENST00000411715 316 ntBASIC5.51□□□□□ -1.53
BRCA2P51587 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.51□□□□□ -1.53
BRCA2P51587 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
BRCA2P51587 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.51□□□□□ -1.53
BRCA2P51587 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.51□□□□□ -1.53
BRCA2P51587 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
BRCA2P51587 H3F3BP2-201ENST00000583907 357 ntBASIC5.51□□□□□ -1.53
BRCA2P51587 AC007497.1-201ENST00000610421 561 ntBASIC5.51□□□□□ -1.53
BRCA2P51587 RNA5SP196-201ENST00000625967 102 ntBASIC5.51□□□□□ -1.53
BRCA2P51587 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.51□□□□□ -1.53
BRCA2P51587 SAMMSON-210ENST00000641260 1308 ntBASIC5.51□□□□□ -1.53
BRCA2P51587 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC5.5□□□□□ -1.53
BRCA2P51587 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
BRCA2P51587 ZNF43-202ENST00000357491 5249 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
BRCA2P51587 AC120338.1-201ENST00000625074 1541 ntBASIC5.5□□□□□ -1.53
BRCA2P51587 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
BRCA2P51587 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.5□□□□□ -1.53
BRCA2P51587 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.5□□□□□ -1.53
BRCA2P51587 AC067852.5-201ENST00000589299 310 ntBASIC5.5□□□□□ -1.53
BRCA2P51587 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.5□□□□□ -1.53
BRCA2P51587 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC5.5□□□□□ -1.53
BRCA2P51587 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
BRCA2P51587 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
BRCA2P51587 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
BRCA2P51587 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
BRCA2P51587 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
BRCA2P51587 YWHAZP2-201ENST00000440317 728 ntBASIC5.5□□□□□ -1.53
BRCA2P51587 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
BRCA2P51587 AL133481.2-203ENST00000607558 139 ntBASIC5.5□□□□□ -1.53
BRCA2P51587 AC087821.1-201ENST00000623639 567 ntBASIC5.5□□□□□ -1.53
BRCA2P51587 PRRC2C-204ENST00000426496 10175 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
BRCA2P51587 CSMD1-218ENST00000635120 11737 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
BRCA2P51587 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
BRCA2P51587 CDK6-201ENST00000265734 11612 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
BRCA2P51587 SP1-202ENST00000426431 7603 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
BRCA2P51587 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
BRCA2P51587 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.5□□□□□ -1.53
BRCA2P51587 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.49□□□□□ -1.53
BRCA2P51587 SVEP1-203ENST00000401783 12350 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
BRCA2P51587 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
BRCA2P51587 GLUD1P3-202ENST00000508551 200 ntBASIC5.49□□□□□ -1.53
BRCA2P51587 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.49□□□□□ -1.53
BRCA2P51587 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.49□□□□□ -1.53
BRCA2P51587 AC005858.4-201ENST00000623191 700 ntBASIC5.49□□□□□ -1.53
BRCA2P51587 OR7E122P-202ENST00000641144 6171 ntBASIC5.49□□□□□ -1.53
BRCA2P51587 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
BRCA2P51587 FNDC3A-206ENST00000541916 6328 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
BRCA2P51587 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
BRCA2P51587 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
BRCA2P51587 AL450345.1-202ENST00000605741 3881 ntBASIC5.49□□□□□ -1.53
BRCA2P51587 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
BRCA2P51587 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
BRCA2P51587 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
BRCA2P51587 SNORA2.3-201ENST00000383920 135 ntBASIC5.49□□□□□ -1.53
BRCA2P51587 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
BRCA2P51587 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.49□□□□□ -1.53
BRCA2P51587 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.49□□□□□ -1.53
BRCA2P51587 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.49□□□□□ -1.53
BRCA2P51587 MTCO1P35-201ENST00000515270 228 ntBASIC5.49□□□□□ -1.53
BRCA2P51587 AC027807.1-201ENST00000559921 996 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms